RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SOD3P08294 240 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 LIMS3P0CW19 117 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 LIMS4P0CW20 117 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 RNASE2P10153 161 aaKnown RBP1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 SYT1P21579 422 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 PRTN3P24158 256 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 COL8A2P25067 703 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 HLA-DMAP28067 261 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 PSMB6P28072 239 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 SNRPFP62306 86 aaKnown RBP1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 IL15RAQ13261 267 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 PMS2P3Q13401 168 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 RAB31Q13636 194 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 FLOT2Q14254 428 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 TMEM241Q24JQ0 296 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 UBE2NLQ5JXB2 153 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 WDR59Q6PJI9 974 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 ZNF720Q7Z2F6 126 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 TMEM144Q7Z5S9 345 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 C3orf22Q8N5N4 141 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 C1orf64Q8NEQ6 169 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 WFDC11Q8NEX6 87 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 OR4C13Q8NGP0 309 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 CT55Q8WUE5 264 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 FXYD5Q96DB9 178 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 FAM210AQ96ND0 272 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 OLFM3Q96PB7 478 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 SMR3AQ99954 134 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 B9D2Q9BPU9 175 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 SEC22CQ9BRL7 303 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 TCEAL2Q9H3H9 227 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 ZNF586Q9NXT0 402 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 URGCP-MRPS24S4R325 110 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 DOCK5Q9H7D0 1870 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 MYH6P13533 1939 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 PTPRDP23468 1912 aa1.6□□□□□ -2.15
HMGB1P27-201ENST00000431429 ZFC3H1O60293 1989 aaKnown RBP1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 NOTCH1P46531 2555 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 POLEQ07864 2286 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 DNHD1Q96M86 4753 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 IGHV3-21A0A0B4J1V1 117 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 J3QLI3 93 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 HCRTO43612 131 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 UGT2B11O75310 529 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 SOX14O95416 240 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 ASS1P00966 412 aaKnown RBP1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 NRASP01111 189 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 HRASP01112 189 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 KRASP01116 189 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 HLA-AP01891 365 aaKnown RBP1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 KDELR2P33947 212 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 UGT2B10P36537 528 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 RPS24P62847 133 aaKnown RBP1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 DMTNQ08495 405 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 GOLGA7BQ2TAP0 167 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 DGAT2L6Q6ZPD8 337 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 SSX7Q7RTT5 188 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 DPPA2Q7Z7J5 298 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 COMTD1Q86VU5 262 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 AMN1Q8IY45 258 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 C12orf29Q8N999 325 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 OR7G1Q8NGA0 311 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 OR6K3Q8NGY3 331 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 OR1P1Q8NH06 330 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 DYNC2LI1Q8TCX1 351 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 RNASEH2CQ8TDP1 164 aaKnown RBP1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 MAL2Q969L2 176 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 LINC01587Q99440 93 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 APOL4Q9BPW4 351 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 EBPLQ9BY08 206 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 PLA2G12AQ9BZM1 189 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 SLC25A31Q9H0C2 315 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 UCK1Q9HA47 277 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 INIPQ9NRY2 104 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 EURLQ9NYK6 297 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 TAS2R13Q9NYV9 303 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 ZNF492Q9P255 531 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 BTRCQ9Y297 605 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 TBL2Q9Y4P3 447 aaKnown RBP1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 ZNF780BQ9Y6R6 833 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 MYH7P12883 1935 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 MYLKQ15746 1914 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 CEP192Q8TEP8 1941 aa1.59□□□□□ -2.15
HMGB1P27-201ENST00000431429 HIVEP2P31629 2446 aa1.59□□□□□ -2.16
HMGB1P27-201ENST00000431429 RTTNQ86VV8 2226 aa1.59□□□□□ -2.16
HMGB1P27-201ENST00000431429 ABCA4P78363 2273 aa1.59□□□□□ -2.16
HMGB1P27-201ENST00000431429 MYO18AQ92614 2054 aaKnown RBP1.59□□□□□ -2.16
HMGB1P27-201ENST00000431429 PRRC2CQ9Y520 2896 aaKnown RBP1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 IGHV1-45A0A0A0MS14 117 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 A0A1W2PRG6 482 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 A8MWP4 228 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 H3BP45 60 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 H3BQ85 93 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 C19orf84I3L1E1 186 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 ENTPD6O75354 484 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 IGLV3-27P01718 113 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 UQCRHP07919 91 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 GTF2F2P13984 249 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 CD34P28906 385 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 TGFBR2P37173 567 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms