RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 DSPPQ9NZW4 1301 aa14.28□□□□□ -0.12
RIF1-204ENST00000430328 NKX2-2O95096 273 aa14.28□□□□□ -0.12
RIF1-204ENST00000430328 TNFRSF6BO95407 300 aa14.28□□□□□ -0.12
RIF1-204ENST00000430328 P2RY4P51582 365 aa14.28□□□□□ -0.12
RIF1-204ENST00000430328 LMO7DNF2Z398 122 aa14.28□□□□□ -0.12
RIF1-204ENST00000430328 J3QT63 122 aa14.28□□□□□ -0.12
RIF1-204ENST00000430328 CCL4L1Q8NHW4 92 aa14.28□□□□□ -0.12
RIF1-204ENST00000430328 TNFRSF14Q92956 283 aa14.28□□□□□ -0.12
RIF1-204ENST00000430328 SH3BGRL3Q9H299 93 aa14.28□□□□□ -0.12
RIF1-204ENST00000430328 PRF1P14222 555 aa14.28□□□□□ -0.12
RIF1-204ENST00000430328 COL10A1Q03692 680 aa14.27□□□□□ -0.12
RIF1-204ENST00000430328 CENPWQ5EE01 88 aa14.27□□□□□ -0.12
RIF1-204ENST00000430328 DMKNQ6E0U4 476 aaPredicted RBP14.27□□□□□ -0.12
RIF1-204ENST00000430328 CLDND2Q8NHS1 167 aa14.27□□□□□ -0.12
RIF1-204ENST00000430328 IFT172Q9UG01 1749 aa14.27□□□□□ -0.12
RIF1-204ENST00000430328 SHPRHQ149N8 1683 aa14.27□□□□□ -0.12
RIF1-204ENST00000430328 LILRA5A6NI73 299 aa14.27□□□□□ -0.12
RIF1-204ENST00000430328 M0R381 172 aa14.27□□□□□ -0.12
RIF1-204ENST00000430328 PEX7O00628 323 aa14.27□□□□□ -0.12
RIF1-204ENST00000430328 RIPPLY2Q5TAB7 128 aa14.27□□□□□ -0.12
RIF1-204ENST00000430328 DNM1P46Q6ZS02 220 aa14.27□□□□□ -0.12
RIF1-204ENST00000430328 OR4X2Q8NGF9 303 aa14.27□□□□□ -0.12
RIF1-204ENST00000430328 SSBP2P81877 361 aaPredicted RBP14.27□□□□□ -0.12
RIF1-204ENST00000430328 MIC13Q5XKP0 118 aa14.27□□□□□ -0.12
RIF1-204ENST00000430328 CST9LQ9H4G1 147 aa14.27□□□□□ -0.12
RIF1-204ENST00000430328 TUBA4BQ9H853 241 aa14.27□□□□□ -0.12
RIF1-204ENST00000430328 LAMTOR2Q9Y2Q5 125 aa14.27□□□□□ -0.12
RIF1-204ENST00000430328 EP300Q09472 2414 aaPredicted RBP14.27□□□□□ -0.13
RIF1-204ENST00000430328 OCIAD2Q56VL3 154 aa14.27□□□□□ -0.13
RIF1-204ENST00000430328 MRPL32Q9BYC8 188 aaKnown RBP14.27□□□□□ -0.13
RIF1-204ENST00000430328 GGTLC2Q14390 218 aa14.27□□□□□ -0.13
RIF1-204ENST00000430328 MBD1Q9UIS9 605 aaPredicted RBP14.27□□□□□ -0.13
RIF1-204ENST00000430328 GPR6P46095 362 aaPredicted RBP14.27□□□□□ -0.13
RIF1-204ENST00000430328 ACER2Q5QJU3 275 aa14.27□□□□□ -0.13
RIF1-204ENST00000430328 HOGA1Q86XE5 327 aa14.27□□□□□ -0.13
RIF1-204ENST00000430328 SDK2Q58EX2 2172 aa14.27□□□□□ -0.13
RIF1-204ENST00000430328 PAQR9Q6ZVX9 377 aa14.26□□□□□ -0.13
RIF1-204ENST00000430328 RSPO3Q9BXY4 272 aaPredicted RBP14.26□□□□□ -0.13
RIF1-204ENST00000430328 PLSCR4Q9NRQ2 329 aa14.26□□□□□ -0.13
RIF1-204ENST00000430328 IGKV3D-20A0A0C4DH25 116 aa14.26□□□□□ -0.13
RIF1-204ENST00000430328 ZNF415Q09FC8 603 aa14.26□□□□□ -0.13
RIF1-204ENST00000430328 LOC390937A0A1W2PQ73 354 aa14.26□□□□□ -0.13
RIF1-204ENST00000430328 CXCL2P19875 107 aa14.26□□□□□ -0.13
RIF1-204ENST00000430328 RIMBP3CA6NJZ7 1639 aa14.26□□□□□ -0.13
RIF1-204ENST00000430328 RIMBP3BA6NNM3 1639 aa14.26□□□□□ -0.13
RIF1-204ENST00000430328 RIMBP3Q9UFD9 1639 aa14.26□□□□□ -0.13
RIF1-204ENST00000430328 A0A1B0GUT8 65 aa14.26□□□□□ -0.13
RIF1-204ENST00000430328 VWC2LB2RUY7 222 aa14.26□□□□□ -0.13
RIF1-204ENST00000430328 IGKV3-20P01619 116 aa14.26□□□□□ -0.13
RIF1-204ENST00000430328 FOXI3A8MTJ6 420 aaPredicted RBP14.26□□□□□ -0.13
RIF1-204ENST00000430328 ATP5G2Q06055 141 aa14.26□□□□□ -0.13
RIF1-204ENST00000430328 WDR82Q6UXN9 313 aa14.26□□□□□ -0.13
RIF1-204ENST00000430328 TMEM30AQ9NV96 361 aa14.26□□□□□ -0.13
RIF1-204ENST00000430328 HEATR5AQ86XA9 2040 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 VSIG10L2P0DP72 767 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 NPPCP23582 126 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 ZNF488Q96MN9 340 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 ARRDC1-AS1Q9H2J1 176 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 RGPD1P0DJD0 1748 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 M0R2P5 195 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 SPEM2Q0P670 501 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 ASB1Q9Y576 335 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 THY1P04216 161 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 PNLIPP16233 465 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 C1orf185Q5T7R7 199 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 CLEC2AQ6UVW9 174 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 TLNRD1Q9H1K6 362 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 MYOFQ9NZM1 2061 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 ABCA4P78363 2273 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 TMEM252Q8N6L7 170 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 CHST5Q9GZS9 411 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 C1QL1O75973 258 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 TOMM40O96008 361 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 NMBP08949 121 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 HOXD3P31249 432 aaPredicted RBP14.25□□□□□ -0.13
RIF1-204ENST00000430328 FOXA3P55318 350 aaPredicted RBP14.25□□□□□ -0.13
RIF1-204ENST00000430328 FOXC1Q12948 553 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 KLHDC9Q8NEP7 349 aa14.25□□□□□ -0.13
RIF1-204ENST00000430328 C1orf174Q8IYL3 243 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 ORMDL3Q8N138 153 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 SIGLEC14Q08ET2 396 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 ALKAL1Q6UXT8 129 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 TP53I13Q8NBR0 393 aaPredicted RBP14.24□□□□□ -0.13
RIF1-204ENST00000430328 SSC4DQ8WTU2 575 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 ZNF124Q15973 351 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 PRSS53Q2L4Q9 553 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 SAMD5Q5TGI4 173 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 UNQ5815/PRO19632Q6UWF5 114 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 PRR7Q8TB68 274 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 ECM29Q5VYK3 1845 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 GPX4P36969 197 aaPredicted RBP14.24□□□□□ -0.13
RIF1-204ENST00000430328 TRA2AQ13595 282 aaKnown RBP eCLIP14.24□□□□□ -0.132e-8■■■□□ 17.3
RIF1-204ENST00000430328 TMEM171Q8WVE6 324 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 ZNF142P52746 1687 aaPredicted RBP14.24□□□□□ -0.13
RIF1-204ENST00000430328 RND3P61587 244 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 WFDC5Q8TCV5 224 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 PIMREGQ9BSJ6 248 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 LAMTOR3Q9UHA4 124 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 TRAV2A0A0B4J234 112 aa14.24□□□□□ -0.13
RIF1-204ENST00000430328 ZNF576Q9H609 170 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms