RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 ZNF16P17020 682 aaPredicted RBP7.31□□□□□ -1.24
GABPB1-205ENST00000429662 COX5AP20674 150 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 GNLYP22749 145 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 HIST1H2BOP23527 126 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 HIST1H2BBP33778 126 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 HIST1H2BDP58876 126 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 ERVFRD-1P60508 538 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 HIST1H2BCP62807 126 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 GNB2P62879 340 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 RPP30P78346 268 aaKnown RBP7.31□□□□□ -1.24
GABPB1-205ENST00000429662 HIST2H2BEQ16778 126 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 TMEM249Q2WGJ8 235 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 SPANXN5Q5MJ07 72 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.31□□□□□ -1.24
GABPB1-205ENST00000429662 LCN15Q6UWW0 184 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 C1orf229Q6ZS94 237 aaPredicted RBP7.31□□□□□ -1.24
GABPB1-205ENST00000429662 C17orf78Q8N4C9 275 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 ZNF709Q8N972 641 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 TMEM178AQ8NBL3 297 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 OR10P1Q8NGE3 313 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 NINJ1Q92982 152 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 HIST1H2BHQ93079 126 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 WDYHV1Q96HA8 205 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 LURAP1Q96LR2 239 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 OR5B12Q96R08 314 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 GPHA2Q96T91 129 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 HIST1H2BNQ99877 126 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 HIST1H2BMQ99879 126 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 PYGO2Q9BRQ0 406 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 BCL2L14Q9BZR8 327 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 RBKSQ9H477 322 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 ZNF665Q9H7R5 613 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 SRD5A3Q9H8P0 318 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 PRSS50Q9UI38 385 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 PITPNC1Q9UKF7 332 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 SVILO95425 2214 aa7.31□□□□□ -1.24
GABPB1-205ENST00000429662 TGIF2-C20orf24A0A0A6YYL0 155 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 LRRC30A6NM36 301 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 WDR1O75083 606 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 AGFG2O95081 481 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 VENTXO95231 258 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 IFNA10P01566 189 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 TRGC2P03986 189 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 P0C879 139 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 IL2RGP31785 369 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 MEF2BQ02080 365 aaPredicted RBP7.3□□□□□ -1.24
GABPB1-205ENST00000429662 PAX5Q02548 391 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 ARL16Q0P5N6 197 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 ZNF726P1Q15940 193 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 VWC2Q2TAL6 325 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 ACOT6Q3I5F7 207 aaPredicted RBP7.3□□□□□ -1.24
GABPB1-205ENST00000429662 WDR25Q64LD2 544 aaPredicted RBP7.3□□□□□ -1.24
GABPB1-205ENST00000429662 NCR3LG1Q68D85 454 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 ZNF343Q6P1L6 599 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 C5orf24Q7Z6I8 188 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 HAPLN4Q86UW8 402 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 HIST3H2BBQ8N257 126 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 OR10A7Q8NGE5 316 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 HSD17B10Q99714 261 aaKnown RBP7.3□□□□□ -1.24
GABPB1-205ENST00000429662 TXNDC17Q9BRA2 123 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 CXXC4Q9H2H0 198 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 ZNF71Q9NQZ8 489 aaPredicted RBP7.3□□□□□ -1.24
GABPB1-205ENST00000429662 GFOD1Q9NXC2 390 aa7.3□□□□□ -1.24
GABPB1-205ENST00000429662 A0A1W2PR80 420 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 OR5H1A6NKK0 313 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 MPDU1O75352 247 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 YIF1AO95070 293 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 ADH4P08319 380 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 TRGC1P0CF51 173 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 SRP14P37108 136 aaKnown RBP7.29□□□□□ -1.24
GABPB1-205ENST00000429662 SOX8P57073 446 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 EIF4EBP1Q13541 118 aaPredicted RBP7.29□□□□□ -1.24
GABPB1-205ENST00000429662 BSXQ3C1V8 233 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 ZNF766Q5HY98 468 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 LINC00696Q6ZRV3 163 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 C1orf162Q8NEQ5 155 aaPredicted RBP7.29□□□□□ -1.24
GABPB1-205ENST00000429662 ACY3Q96HD9 319 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 DIRC2Q96SL1 478 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 SSX3Q99909 188 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 SMIM7Q9BQ49 75 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 HES7Q9BYE0 225 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 CHODLQ9H9P2 273 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 PLA2G3Q9NZ20 509 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 URGCP-MRPS24S4R325 110 aa7.29□□□□□ -1.24
GABPB1-205ENST00000429662 MAP1AP78559 2803 aaPredicted RBP7.28□□□□□ -1.24
GABPB1-205ENST00000429662 TRAV20A0A0B4J274 112 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 UBE2L5PA0A1B0GUS4 154 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 H7BYZ3 331 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 CDIPTO14735 213 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 PFN1P07737 140 aaKnown RBP7.28□□□□□ -1.24
GABPB1-205ENST00000429662 CD99P14209 185 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 HIST1H1BP16401 226 aaKnown RBP7.28□□□□□ -1.24
GABPB1-205ENST00000429662 HOXC12P31275 282 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 OR3A1P47881 315 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 FAM3BP58499 235 aaPredicted RBP7.28□□□□□ -1.24
GABPB1-205ENST00000429662 HTD2P86397 168 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 PYY3Q5JQD4 70 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 OR2B11Q5JQS5 317 aa7.28□□□□□ -1.24
GABPB1-205ENST00000429662 COA6Q5JTJ3 125 aaKnown RBP7.28□□□□□ -1.24
GABPB1-205ENST00000429662 H2BFWTQ7Z2G1 175 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms