RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SPRNQ5BIV9 151 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 PRAMEF5Q5TYX0 476 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 STUMQ69YW2 141 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 LCN15Q6UWW0 184 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 SLC35E3Q7Z769 313 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 ZNF429Q86V71 674 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 DIRC2Q96SL1 478 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 S1PR3Q99500 378 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 P2RX4Q99571 388 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 MAP1LC3BQ9GZQ8 125 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 IFI27L2Q9H2X8 130 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 GCM1Q9NP62 436 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 CELSR3Q9NYQ7 3312 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 USP24Q9UPU5 2620 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 A0A1W2PPH5 198 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 PMS2P5A8MQ11 134 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 C17orf112F2Z3M2 114 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 C16orf97H3BN30 126 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 FGF7P21781 194 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 GNB2P62879 340 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 PMS2P11Q13670 270 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 ZNF726P1Q15940 193 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 VWC2Q2TAL6 325 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 ZNF709Q8N972 641 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 OR4A16Q8NH70 328 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 ZDHHC16Q969W1 377 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 TVP23CQ96ET8 276 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 VSIRQ9H7M9 311 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 ZNF665Q9H7R5 613 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 GFOD1Q9NXC2 390 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 RAXQ9Y2V3 346 aa11.35□□□□□ -0.59
THBS3-202ENST00000428962 KBTBD11-OT1A0A1B0GTJ5 212 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 ZFP92A6NM28 416 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 OR2C1O95371 312 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 IFNA17P01571 189 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 CGB3P0DN86 165 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 CGB7P0DN87 165 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 DAOP14920 347 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 NQO2P16083 231 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 TAGLN2P37802 199 aaKnown RBP11.34□□□□□ -0.59
THBS3-202ENST00000428962 TDGF1P3P51864 188 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 SPCS3P61009 180 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 RBMS3Q6XE24 437 aaKnown RBP11.34□□□□□ -0.59
THBS3-202ENST00000428962 OR52E5Q8NH55 327 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 OR4S2Q8NH73 311 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 RAB39BQ96DA2 213 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 ABHD17AQ96GS6 310 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 QTRT1Q9BXR0 403 aaKnown RBP11.34□□□□□ -0.59
THBS3-202ENST00000428962 SLC39A9Q9NUM3 307 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 VAX2Q9UIW0 290 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 TP53TG5Q9Y2B4 290 aa11.34□□□□□ -0.59
THBS3-202ENST00000428962 PRR14LQ5THK1 2151 aa11.33□□□□□ -0.6
THBS3-202ENST00000428962 A0A0G2JNJ9 132 aa11.33□□□□□ -0.6
THBS3-202ENST00000428962 A0A1W2PPE2 198 aa11.33□□□□□ -0.6
THBS3-202ENST00000428962 B4DEV8 164 aa11.33□□□□□ -0.6
THBS3-202ENST00000428962 SOX15O60248 233 aa11.33□□□□□ -0.6
THBS3-202ENST00000428962 OR9G9P0C7N8 305 aa11.33□□□□□ -0.6
THBS3-202ENST00000428962 RAB5AP20339 215 aa11.33□□□□□ -0.6
THBS3-202ENST00000428962 CCKARP32238 428 aa11.33□□□□□ -0.6
THBS3-202ENST00000428962 HOXA1P49639 335 aaPredicted RBP11.33□□□□□ -0.6
THBS3-202ENST00000428962 PNRC1Q12796 327 aaPredicted RBP11.33□□□□□ -0.6
THBS3-202ENST00000428962 C17orf58Q2M2W7 97 aa11.33□□□□□ -0.6
THBS3-202ENST00000428962 DOLPP1Q86YN1 238 aa11.33□□□□□ -0.6
THBS3-202ENST00000428962 ISOC2Q96AB3 205 aa11.33□□□□□ -0.6
THBS3-202ENST00000428962 ADTRPQ96IZ2 230 aa11.33□□□□□ -0.6
THBS3-202ENST00000428962 Q9UFV3 132 aa11.33□□□□□ -0.6
THBS3-202ENST00000428962 KMT2BQ9UMN6 2715 aaPredicted RBP11.33□□□□□ -0.6
THBS3-202ENST00000428962 CTXND1A0A1B0GTU2 59 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 NKX6-3A6NJ46 265 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 ZNF729A6NN14 1252 aaPredicted RBP11.32□□□□□ -0.6
THBS3-202ENST00000428962 IFNA4P05014 189 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 TNFRSF1AP19438 455 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 MAS1LP35410 378 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 THBS3P49746 956 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 OR2B8PP59922 312 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 HABP2Q14520 560 aaPredicted RBP11.32□□□□□ -0.6
THBS3-202ENST00000428962 PDLIM3Q53GG5 364 aaPredicted RBP11.32□□□□□ -0.6
THBS3-202ENST00000428962 RPL39P5Q59GN2 51 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 GFRALQ6UXV0 394 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 LHX4Q969G2 390 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 MALSU1Q96EH3 234 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 PLPPR2Q96GM1 343 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 GAFA1Q96PS6 74 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 SIRT7Q9NRC8 400 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 SVILO95425 2214 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 PROP1O75360 226 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 CYB5R3P00387 301 aaPredicted RBP11.32□□□□□ -0.6
THBS3-202ENST00000428962 ARG1P05089 322 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 CD55P08174 381 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 FGF8P55075 233 aaPredicted RBP11.32□□□□□ -0.6
THBS3-202ENST00000428962 LINC00205P59089 165 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 RAB11AP62491 216 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 DLK1P80370 383 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 TEX36Q5VZQ5 186 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 SSX7Q7RTT5 188 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 ZFP82Q8N141 532 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 ZNF251Q9BRH9 671 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 NPCDR1Q9BY65 106 aa11.32□□□□□ -0.6
THBS3-202ENST00000428962 ACTR3CQ9C0K3 210 aaPredicted RBP11.32□□□□□ -0.6
THBS3-202ENST00000428962 CXorf65A6NEN9 183 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms