RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 TMEM177Q53S58 311 aa13.78□□□□□ -0.2
UPK3BP1-201ENST00000428678 IDO2Q6ZQW0 420 aa13.78□□□□□ -0.2
UPK3BP1-201ENST00000428678 AHSA2Q719I0 299 aa13.78□□□□□ -0.2
UPK3BP1-201ENST00000428678 SRSF12Q8WXF0 261 aaKnown RBP13.78□□□□□ -0.2
UPK3BP1-201ENST00000428678 ACOT12Q8WYK0 555 aa13.78□□□□□ -0.2
UPK3BP1-201ENST00000428678 WDR89Q96FK6 387 aaPredicted RBP13.78□□□□□ -0.2
UPK3BP1-201ENST00000428678 ARHGAP5-AS1Q96IT6 56 aa13.78□□□□□ -0.2
UPK3BP1-201ENST00000428678 SDHAF2Q9NX18 166 aa13.78□□□□□ -0.2
UPK3BP1-201ENST00000428678 HSF4Q9ULV5 492 aa13.78□□□□□ -0.2
UPK3BP1-201ENST00000428678 C2orf70A6NJV1 201 aa13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 BET1O15155 118 aa13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 CD3GP09693 182 aa13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 FOLR2P14207 255 aa13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 EDN2P20800 178 aa13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 SERPINB10P48595 397 aa13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 TAGLNQ01995 201 aaKnown RBP13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 ZNF45Q02386 682 aa13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 PRSS8Q16651 343 aa13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 HSD17B12Q53GQ0 312 aa13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 MS4A15Q8N5U1 240 aa13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 ST6GALNAC5Q9BVH7 336 aa13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 PECRQ9BY49 303 aa13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 PLGRKTQ9HBL7 147 aa13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 ZC4H2Q9NQZ6 224 aa13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 FAM53CQ9NYF3 392 aa13.77□□□□□ -0.21
UPK3BP1-201ENST00000428678 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 PPP5D1E7EU14 171 aa13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 RRASP10301 218 aa13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 KIR2DS2P43631 304 aa13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 UBE2KP61086 200 aa13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 SLC16A13Q7RTY0 426 aa13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 CEACAM19Q7Z692 300 aa13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 FAM89BQ8N5H3 189 aa13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 NANOGP1Q8N7R0 232 aa13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 TEX45Q8NA69 505 aa13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 OR4A4PQ8NGN8 299 aa13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 KCTD12Q96CX2 325 aaKnown RBP13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 C5orf30Q96GV9 206 aa13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 TECRQ9NZ01 308 aaKnown RBP13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 PSORS1C1Q9UIG5 152 aa13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 SELENOKQ9Y6D0 94 aa13.76□□□□□ -0.21
UPK3BP1-201ENST00000428678 KMT2AQ03164 3969 aa13.75□□□□□ -0.21
UPK3BP1-201ENST00000428678 TRBV9A0A0B4J1U6 114 aa13.75□□□□□ -0.21
UPK3BP1-201ENST00000428678 FOXI3A8MTJ6 420 aaPredicted RBP13.75□□□□□ -0.21
UPK3BP1-201ENST00000428678 FABP7O15540 132 aa13.75□□□□□ -0.21
UPK3BP1-201ENST00000428678 CRYZL1O95825 349 aa13.75□□□□□ -0.21
UPK3BP1-201ENST00000428678 HLA-AP01891 365 aaKnown RBP13.75□□□□□ -0.21
UPK3BP1-201ENST00000428678 TMEM50BP56557 158 aa13.75□□□□□ -0.21
UPK3BP1-201ENST00000428678 DHRSXQ8N5I4 330 aa13.75□□□□□ -0.21
UPK3BP1-201ENST00000428678 NECAP1Q8NC96 275 aa13.75□□□□□ -0.21
UPK3BP1-201ENST00000428678 OR10J5Q8NHC4 309 aa13.75□□□□□ -0.21
UPK3BP1-201ENST00000428678 OVOL2Q9BRP0 275 aa13.75□□□□□ -0.21
UPK3BP1-201ENST00000428678 RBM7Q9Y580 266 aaKnown RBP13.75□□□□□ -0.21
UPK3BP1-201ENST00000428678 ACTL6BO94805 426 aa13.74□□□□□ -0.21
UPK3BP1-201ENST00000428678 CD37P11049 281 aa13.74□□□□□ -0.21
UPK3BP1-201ENST00000428678 MRPS15P82914 257 aaKnown RBP13.74□□□□□ -0.21
UPK3BP1-201ENST00000428678 C15orf32Q32M92 178 aa13.74□□□□□ -0.21
UPK3BP1-201ENST00000428678 IGSF11Q5DX21 431 aa13.74□□□□□ -0.21
UPK3BP1-201ENST00000428678 BPIFB6Q8NFQ5 453 aa13.74□□□□□ -0.21
UPK3BP1-201ENST00000428678 SPIN2AQ99865 258 aa13.74□□□□□ -0.21
UPK3BP1-201ENST00000428678 SPIN2BQ9BPZ2 258 aa13.74□□□□□ -0.21
UPK3BP1-201ENST00000428678 GGTLC1Q9BX51 225 aa13.74□□□□□ -0.21
UPK3BP1-201ENST00000428678 SLC17A2O00624 439 aa13.73□□□□□ -0.21
UPK3BP1-201ENST00000428678 GGCTO75223 188 aaKnown RBP13.73□□□□□ -0.21
UPK3BP1-201ENST00000428678 OR2J3O76001 311 aa13.73□□□□□ -0.21
UPK3BP1-201ENST00000428678 OR2C1O95371 312 aa13.73□□□□□ -0.21
UPK3BP1-201ENST00000428678 TPBGQ13641 420 aa13.73□□□□□ -0.21
UPK3BP1-201ENST00000428678 RAB11BQ15907 218 aa13.73□□□□□ -0.21
UPK3BP1-201ENST00000428678 PLAC9Q5JTB6 97 aa13.73□□□□□ -0.21
UPK3BP1-201ENST00000428678 LAIR2Q6ISS4 152 aa13.73□□□□□ -0.21
UPK3BP1-201ENST00000428678 CACNG8Q8WXS5 425 aa13.73□□□□□ -0.21
UPK3BP1-201ENST00000428678 DDB2Q92466 427 aa13.73□□□□□ -0.21
UPK3BP1-201ENST00000428678 CABLES2Q9BTV7 478 aa13.73□□□□□ -0.21
UPK3BP1-201ENST00000428678 ZNF430Q9H8G1 570 aaPredicted RBP13.73□□□□□ -0.21
UPK3BP1-201ENST00000428678 HERC2O95714 4834 aa13.73□□□□□ -0.21
UPK3BP1-201ENST00000428678 NUPR2A6NF83 97 aa13.72□□□□□ -0.21
UPK3BP1-201ENST00000428678 UCHL1P09936 223 aa13.72□□□□□ -0.21
UPK3BP1-201ENST00000428678 FAM209BQ5JX69 171 aa13.72□□□□□ -0.21
UPK3BP1-201ENST00000428678 C10orf55Q5SWW7 151 aa13.72□□□□□ -0.21
UPK3BP1-201ENST00000428678 C8orf59Q8N0T1 100 aaPredicted RBP13.72□□□□□ -0.21
UPK3BP1-201ENST00000428678 TMEM61Q8N0U2 210 aa13.72□□□□□ -0.21
UPK3BP1-201ENST00000428678 OR56B1Q8NGI3 324 aa13.72□□□□□ -0.21
UPK3BP1-201ENST00000428678 OR52B4Q8NGK2 314 aa13.72□□□□□ -0.21
UPK3BP1-201ENST00000428678 ADTRPQ96IZ2 230 aa13.72□□□□□ -0.21
UPK3BP1-201ENST00000428678 GFI1Q99684 422 aa13.72□□□□□ -0.21
UPK3BP1-201ENST00000428678 MND1Q9BWT6 205 aa13.72□□□□□ -0.21
UPK3BP1-201ENST00000428678 LOC102724200A0A096LPH7 203 aaPredicted RBP13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 TRBV6-7A0A0A0MS04 114 aa13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 LGALS9O00182 355 aa13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 CREBL2O60519 120 aaPredicted RBP13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 GNAO1P09471 354 aa13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 GSTT2P0CG29 244 aa13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 GSTT2BP0CG30 244 aa13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 CBLN1P23435 193 aa13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 CLDN12P56749 244 aa13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 ZNF57Q68EA5 555 aaPredicted RBP13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 SLC25A42Q86VD7 318 aa13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 TTC9CQ8N5M4 171 aa13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 OSR1Q8TAX0 266 aaPredicted RBP13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 GINS4Q9BRT9 223 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms