RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 Q5BKY6 102 aa9.77□□□□□ -0.85
RFC4-206ENST00000427785 NMSQ5H8A3 153 aa9.77□□□□□ -0.85
RFC4-206ENST00000427785 TPTE2P1Q5T6R2 138 aa9.77□□□□□ -0.85
RFC4-206ENST00000427785 RUSC1-AS1Q66K80 236 aa9.77□□□□□ -0.85
RFC4-206ENST00000427785 TCTEX1D1Q8N7M0 179 aa9.77□□□□□ -0.85
RFC4-206ENST00000427785 ZBTB8BQ8NAP8 495 aaPredicted RBP9.77□□□□□ -0.85
RFC4-206ENST00000427785 C17orf50Q8WW18 174 aa9.77□□□□□ -0.85
RFC4-206ENST00000427785 R3HDM4Q96D70 268 aa9.77□□□□□ -0.85
RFC4-206ENST00000427785 OR2A7Q96R45 310 aa9.77□□□□□ -0.85
RFC4-206ENST00000427785 RANBP3Q9H6Z4 567 aaPredicted RBP9.77□□□□□ -0.85
RFC4-206ENST00000427785 TMED3Q9Y3Q3 217 aa9.77□□□□□ -0.85
RFC4-206ENST00000427785 AUP1Q9Y679 476 aa9.77□□□□□ -0.85
RFC4-206ENST00000427785 PDZD2O15018 2839 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 PLXNB1O43157 2135 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 ITPR2Q14571 2701 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 IGHV1-3A0A0C4DH29 117 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 A0A1W2PPI3 338 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 LY6LH3BQJ8 138 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 H7C2Y5 167 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 RBFOX2O43251 390 aaKnown RBP eCLIP9.76□□□□□ -0.85
RFC4-206ENST00000427785 SCGB1D2O95969 90 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 VDAC1P21796 283 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 S100A10P60903 97 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 THOC7Q6I9Y2 204 aaKnown RBP9.76□□□□□ -0.85
RFC4-206ENST00000427785 SSX9Q7RTT3 188 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 VKORC1L1Q8N0U8 176 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 GRPEL2Q8TAA5 225 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 CD300LFQ8TDQ1 290 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 GPR146Q96CH1 333 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 C2orf50Q96LR7 162 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 FOXC2Q99958 501 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 FAM212BQ9NTI7 297 aaPredicted RBP9.76□□□□□ -0.85
RFC4-206ENST00000427785 COMMD9Q9P000 198 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 GSKIPQ9P0R6 139 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 CACNG5Q9UF02 275 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 HILPDAQ9Y5L2 63 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 CSPG4Q6UVK1 2322 aa9.76□□□□□ -0.85
RFC4-206ENST00000427785 TRAV14DV4A0A0A6YYC5 116 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 MARCH11A6NNE9 402 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 LEUTXA8MZ59 168 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 SMAD7O15105 426 aaKnown RBP9.75□□□□□ -0.85
RFC4-206ENST00000427785 NPFFO15130 113 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 HPRT1P00492 218 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 KRASP01116 189 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 GAPDHP04406 335 aaKnown RBP9.75□□□□□ -0.85
RFC4-206ENST00000427785 IGKV1-16P04430 117 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 SAA4P35542 130 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 EIF2B2P49770 351 aaKnown RBP9.75□□□□□ -0.85
RFC4-206ENST00000427785 UBE2E1P51965 193 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 SRSF4Q08170 494 aaKnown RBP9.75□□□□□ -0.85
RFC4-206ENST00000427785 MOB3BQ86TA1 216 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 DYNAPQ8N1N2 210 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 CIARTQ8N365 385 aaPredicted RBP9.75□□□□□ -0.85
RFC4-206ENST00000427785 OR5AN1Q8NGI8 311 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 PPP1R1CQ8WVI7 109 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 RRNAD1Q96FB5 475 aaKnown RBP9.75□□□□□ -0.85
RFC4-206ENST00000427785 SPIN2AQ99865 258 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 SPIN2BQ9BPZ2 258 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 NMES1Q9C002 83 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 C7orf69Q9H7B7 122 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 PLEKHA2Q9HB19 425 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 DPM3Q9P2X0 92 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 ITGB1BP2Q9UKP3 347 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 WASHC3Q9Y3C0 194 aa9.75□□□□□ -0.85
RFC4-206ENST00000427785 FXYD6-FXYD2A0A087WZ82 144 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 CENPVL3A0A0U1RRI6 287 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 TIMM23O14925 209 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 TXNL1O43396 289 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 TGFAP01135 160 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 C1QBP02746 253 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 P0C879 139 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 IGHV4-38-2P0DP08 117 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 CEACAM3P40198 252 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 GZMKP49863 264 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 LGALS4P56470 323 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 ERVK-16P61578 105 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 RAB32Q13637 225 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 MINOS1Q5TGZ0 78 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 DHRS7BQ6IAN0 325 aaPredicted RBP9.74□□□□□ -0.85
RFC4-206ENST00000427785 PDPNQ86YL7 162 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 FOXRED2Q8IWF2 684 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 DMBX1Q8NFW5 382 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 OR4D5Q8NGN0 318 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 OR1S1Q8NH92 325 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 ASB13Q8WXK3 278 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 LSM10Q969L4 123 aaKnown RBP9.74□□□□□ -0.85
RFC4-206ENST00000427785 PPP1R14BQ96C90 147 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 HARBI1Q96MB7 349 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 TBL2Q9Y4P3 447 aaKnown RBP9.74□□□□□ -0.85
RFC4-206ENST00000427785 LSM5Q9Y4Y9 91 aaKnown RBP9.74□□□□□ -0.85
RFC4-206ENST00000427785 MINOS1-NBL1R4GNA1 71 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 MYO9AB2RTY4 2548 aa9.74□□□□□ -0.85
RFC4-206ENST00000427785 FLNAP21333 2647 aaKnown RBP9.73□□□□□ -0.85
RFC4-206ENST00000427785 ASH1LQ9NR48 2969 aaKnown RBP9.73□□□□□ -0.85
RFC4-206ENST00000427785 PIGBOS1A0A0B4J2F0 54 aa9.73□□□□□ -0.85
RFC4-206ENST00000427785 IGHV1-69DA0A0B4J2H0 117 aa9.73□□□□□ -0.85
RFC4-206ENST00000427785 SHOXO15266 292 aa9.73□□□□□ -0.85
RFC4-206ENST00000427785 ATG12O94817 140 aa9.73□□□□□ -0.85
RFC4-206ENST00000427785 AVPP01185 164 aa9.73□□□□□ -0.85
RFC4-206ENST00000427785 IGHV1-69P01742 117 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms