RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 SEC11BP0C7V7 166 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 PIPP12273 146 aaPredicted RBP1.25□□□□□ -2.21
PTPRC-208ENST00000427110 CCL5P13501 91 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 ELK4P28324 431 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 HTR2CP28335 458 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 CD40LGP29965 261 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 SERPINB1P30740 379 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 TGFBR2P37173 567 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 NUP62P37198 522 aaPredicted RBP1.25□□□□□ -2.21
PTPRC-208ENST00000427110 ETV6P41212 452 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 CCR2P41597 374 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 SERPINB10P48595 397 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 TGM4P49221 684 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 CARD18P57730 90 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 TBPL1P62380 186 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 HBA1P69905 142 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 CDK6Q00534 326 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 RELAQ04206 551 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 ZNF846Q147U1 533 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 SPCS2Q15005 226 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 NEDD8Q15843 81 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 IGFBP7Q16270 282 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 HNRNPA1L2Q32P51 320 aaKnown RBP1.25□□□□□ -2.21
PTPRC-208ENST00000427110 TMEM69Q5SWH9 247 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 IDNKQ5T6J7 187 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 C9orf64Q5T6V5 341 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 NIPAL1Q6NVV3 410 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 FAM231DQ6ZW35 169 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 COMMD6Q7Z4G1 85 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 DEFB128Q7Z7B8 93 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 CLECL1Q8IZS7 167 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 LINC00471Q8N535 108 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 ZDHHC22Q8N966 263 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 ASCC1Q8N9N2 400 aaKnown RBP1.25□□□□□ -2.21
PTPRC-208ENST00000427110 BPIFB6Q8NFQ5 453 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 OR4D6Q8NGJ1 314 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 OR13C9Q8NGT0 318 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 OR5H2Q8NGV7 314 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 OR6K2Q8NGY2 324 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 FAM57AQ8TBR7 257 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 DYNC2LI1Q8TCX1 351 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 C16orf78Q8WTQ4 265 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 RASSF5Q8WWW0 418 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 C22orf15Q8WYQ4 148 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 OR5P2Q8WZ92 322 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 RORBQ92753 470 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 SMIM8Q96KF7 97 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 FAM210AQ96ND0 272 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 OR2M4Q96R27 311 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 OR2A7Q96R45 310 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 METTL26Q96S19 204 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 APOL4Q9BPW4 351 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 BBS2Q9BXC9 721 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 CDCA4Q9BXL8 241 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 PCBD2Q9H0N5 130 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 OR52A5Q9H2C5 316 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 SLC38A1Q9H2H9 487 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 BCL2L10Q9HD36 194 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 ABCB9Q9NP78 766 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 ACOT13Q9NPJ3 140 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 SDHAF3Q9NRP4 125 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 ACER3Q9NUN7 267 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 TAS2R9Q9NYW1 312 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 CCL26Q9Y258 94 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 ERGIC3Q9Y282 383 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 POFUT2Q9Y2G5 429 aa1.25□□□□□ -2.21
PTPRC-208ENST00000427110 CHTOPQ9Y3Y2 248 aaKnown RBP1.25□□□□□ -2.21
PTPRC-208ENST00000427110 CPAMD8Q8IZJ3 1885 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 PNMA8CA0A1B0GUJ8 204 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 GNG14A0A1W2PPG7 69 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 IRGMA1A4Y4 181 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 FUOMA2VDF0 154 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 EFCAB10A6NFE3 127 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 METTL15A6NJ78 407 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 EFCAB9A8MZ26 197 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 C10orf142B7Z368 130 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 hCG_2039718K7EN88 272 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 M0R1B8 84 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 CCRL2O00421 344 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 HMGN4O00479 90 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 KPNA3O00505 521 aaPredicted RBP1.24□□□□□ -2.21
PTPRC-208ENST00000427110 FAAHO00519 579 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 KPNA4O00629 521 aaPredicted RBP1.24□□□□□ -2.21
PTPRC-208ENST00000427110 FFAR1O14842 300 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 GMDSO60547 372 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 PFDN1O60925 122 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 KRTAP5-8O75690 187 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 POP7O75817 140 aaKnown RBP1.24□□□□□ -2.21
PTPRC-208ENST00000427110 KCNK2O95069 426 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 GADD45GO95257 159 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 IGLV6-57P01721 117 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 C1QCP02747 245 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 CRYGCP07315 174 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 GUSBP08236 651 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 IL3P08700 152 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 OCM2P0CE71 109 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 OCMP0CE72 109 aaPredicted RBP1.24□□□□□ -2.21
PTPRC-208ENST00000427110 LIPCP11150 499 aa1.24□□□□□ -2.21
PTPRC-208ENST00000427110 HLA-EP13747 358 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms