RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 JPT1Q9UK76 154 aa15.38■□□□□ 0.05
ARHGEF28-203ENST00000426542 HOXB1P14653 301 aaPredicted RBP15.38■□□□□ 0.05
ARHGEF28-203ENST00000426542 DLX6P56179 175 aa15.38■□□□□ 0.05
ARHGEF28-203ENST00000426542 WNT5BQ9H1J7 359 aa15.38■□□□□ 0.05
ARHGEF28-203ENST00000426542 SCGB1A1P11684 91 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 NUP37Q8NFH4 326 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 SRSF12Q8WXF0 261 aaKnown RBP15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 COL25A1Q9BXS0 654 aaPredicted RBP15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 SHANK3Q9BYB0 1731 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 IGHV1-69-2A0A0G2JMI3 117 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 GPX1P07203 203 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 SAXO1Q8IYX7 474 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 SLC25A38Q96DW6 304 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 NINQ8N4C6 2090 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 KCNE5Q9UJ90 142 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 PRR19A6NJB7 356 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 TXNDC17Q9BRA2 123 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 DCTN5Q9BTE1 182 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 G6PC2Q9NQR9 355 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 TGIF2-C20orf24A0A0A6YYL0 155 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 NPBWR2P48146 333 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 HINT1P49773 126 aaPredicted RBP15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 SH3BGRL3Q9H299 93 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 MYO16Q9Y6X6 1858 aa15.37■□□□□ 0.05
ARHGEF28-203ENST00000426542 EPOPA6NHQ4 379 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 GCM2O75603 506 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 C8orf88P0DMB2 117 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 RPS20P60866 119 aaKnown RBP15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 PCOLCEQ15113 449 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 PNKDQ8N490 385 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 OR9G1Q8NH87 305 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 LGALS3P17931 250 aaKnown RBP15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 C19orf48Q6RUI8 117 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 ZNF818PQ6ZRF7 136 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 GALNT14Q96FL9 552 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 SGK494Q96LW2 274 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 SFXN3Q9BWM7 321 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 IGKV3OR2-268A0A0C4DH90 116 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 GCGP01275 180 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 PDLIM4P50479 330 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 ZNF660Q6AZW8 331 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 ZCCHC14Q8WYQ9 949 aaKnown RBP15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 CLEC7AQ9BXN2 247 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 COL5A1-AS1Q5SY13 56 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 GPR82Q96P67 336 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 GDF9O60383 454 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 HLA-DQA1P01909 254 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 PEAR1Q5VY43 1037 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 OR4C13Q8NGP0 309 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 DPH3Q96FX2 82 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 CFHR5Q9BXR6 569 aa15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 RALYQ9UKM9 306 aaKnown RBP15.36■□□□□ 0.05
ARHGEF28-203ENST00000426542 CRYBB3P26998 211 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 OTX1P32242 354 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 EEF1AKMT3Q96AZ1 226 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 Q96M66 194 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 HIST1H4GQ99525 98 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 FAM90A26D6RGX4 464 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 LEPROTL1O95214 131 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 CENPVQ7Z7K6 275 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 FHL5Q5TD97 284 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 IGHV3-48P01763 117 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 FCARP24071 287 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 FAM74A4Q5TZK3 123 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 OR1P1Q8NH06 330 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 KLK15Q9H2R5 256 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 C5orf66Q9H5L9 145 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 FOXJ2Q9P0K8 574 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 ZNF729A6NN14 1252 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 H0YL77 283 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 TMEM54Q969K7 222 aa15.35■□□□□ 0.05
ARHGEF28-203ENST00000426542 A0A1W2PQM1 296 aa15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 ABLIM2Q6H8Q1 611 aa15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 OR51G1Q8NGK1 321 aa15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 TMEM186Q96B77 213 aa15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 LOC101059948A0A1B0GTJ6 334 aa15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 ZNF56Q15929 161 aa15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 TRIP12Q14669 1992 aaPredicted RBP15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 IGKV1D-42A0A075B6H8 117 aa15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 SYNGR3O43761 229 aa15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 LIPFP07098 398 aa15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 PTGDSP41222 190 aa15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 RELQ04864 619 aaPredicted RBP15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 LINC01560Q8TB33 94 aa15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 NPIPB11E5RHQ5 1161 aa15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 COX5BP10606 129 aa15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 NMBP08949 121 aa15.34■□□□□ 0.05
ARHGEF28-203ENST00000426542 IGKV3-20P01619 116 aa15.33■□□□□ 0.05
ARHGEF28-203ENST00000426542 IGHMP01871 453 aa15.33■□□□□ 0.05
ARHGEF28-203ENST00000426542 AQP10Q96PS8 301 aa15.33■□□□□ 0.05
ARHGEF28-203ENST00000426542 TCF19Q9Y242 345 aa15.33■□□□□ 0.05
ARHGEF28-203ENST00000426542 ZNFX1Q9P2E3 1918 aaKnown RBP15.33■□□□□ 0.05
ARHGEF28-203ENST00000426542 PIN1P1O15428 100 aa15.33■□□□□ 0.04
ARHGEF28-203ENST00000426542 NPPCP23582 126 aa15.33■□□□□ 0.04
ARHGEF28-203ENST00000426542 CRYBA2P53672 197 aa15.33■□□□□ 0.04
ARHGEF28-203ENST00000426542 RIPPLY2Q5TAB7 128 aa15.33■□□□□ 0.04
ARHGEF28-203ENST00000426542 GREM1O60565 184 aa15.33■□□□□ 0.04
ARHGEF28-203ENST00000426542 FABP2P12104 132 aa15.33■□□□□ 0.04
ARHGEF28-203ENST00000426542 SPSB4Q96A44 273 aa15.33■□□□□ 0.04
ARHGEF28-203ENST00000426542 TMEM74BQ9NUR3 256 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms