RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 TAAR3PQ9P1P4 343 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 SLC23A2Q9UGH3 650 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 NAT8BQ9UHF3 227 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 NUFIP1Q9UHK0 495 aaKnown RBP2.74□□□□□ -1.97
SF3B1-205ENST00000424674 AK3Q9UIJ7 227 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 SPEF2Q9C093 1822 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 PLCH2O75038 1416 aa2.74□□□□□ -1.97
SF3B1-205ENST00000424674 WDR62O43379 1518 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 TRAV5A0A0B4J249 113 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 IGHV3-35A0A0C4DH35 117 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 C20orf202A1L168 122 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 B4DEV8 164 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 C9JAW5 83 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 F6UZH7 168 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 J3QR89 54 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 GABARAPO95166 117 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 OR2H2O95918 312 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 HLA-DQB2P05538 268 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 ADRA2AP08913 450 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 ZSCAN5DPP0CG00 497 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 SMIM10L2AP0DMW4 78 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 SMIM10L2BP0DMW5 78 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 BCL2P10415 239 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 IMPA1P29218 277 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 CCR2P41597 374 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 CA7P43166 264 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 DEFA1P59665 94 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 HIST1H1AQ02539 215 aaPredicted RBP2.73□□□□□ -1.97
SF3B1-205ENST00000424674 DHRS2Q13268 280 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 ENDOGQ14249 297 aaKnown RBP2.73□□□□□ -1.97
SF3B1-205ENST00000424674 NEDD8Q15843 81 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 RSPO1Q2MKA7 263 aaPredicted RBP2.73□□□□□ -1.97
SF3B1-205ENST00000424674 LINC00303Q3SY05 128 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 LRP11Q86VZ4 500 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 TCTE3Q8IZS6 198 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 OR8I2Q8N0Y5 310 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 SLC22A24Q8N4F4 322 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 C12orf45Q8N5I9 185 aaPredicted RBP2.73□□□□□ -1.97
SF3B1-205ENST00000424674 OR51T1Q8NGJ9 327 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 SLC25A40Q8TBP6 338 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 RTN4IP1Q8WWV3 396 aaPredicted RBP2.73□□□□□ -1.97
SF3B1-205ENST00000424674 KLK6Q92876 244 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 FAM104AQ969W3 186 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 C2orf50Q96LR7 162 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 SOSTQ9BQB4 213 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 RTL8AQ9BWD3 113 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF436Q9C0F3 470 aaPredicted RBP2.73□□□□□ -1.97
SF3B1-205ENST00000424674 MED28Q9H204 178 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 IFI27L2Q9H2X8 130 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF696Q9H7X3 374 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 TMEM38BQ9NVV0 291 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 DHRS4-AS1Q9P1J3 65 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 CTSZQ9UBR2 303 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 TRAPPC2LQ9UL33 140 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 HIGD1AQ9Y241 93 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 PYGO1Q9Y3Y4 419 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 NOS1P29475 1434 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 FGD6Q6ZV73 1430 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 ROBO3Q96MS0 1386 aa2.73□□□□□ -1.97
SF3B1-205ENST00000424674 UHRF1BP1LA0JNW5 1464 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 DENND4BO75064 1496 aaPredicted RBP2.72□□□□□ -1.97
SF3B1-205ENST00000424674 DNMT1P26358 1616 aaKnown RBP2.72□□□□□ -1.97
SF3B1-205ENST00000424674 A0A0J9YY10 115 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 A0A1B0GX78 115 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 TMEM72A0PK05 275 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 KRBOX1C9JBD0 128 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 NDUFC2-KCTD14E9PQ53 114 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 J3QRK9 145 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 EIF4G3O43432 1585 aaKnown RBP2.72□□□□□ -1.97
SF3B1-205ENST00000424674 GNG7O60262 68 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF253O75346 499 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 SERF1AO75920 110 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 S100A11P31949 105 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 EVX1P49640 407 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF83P51522 516 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 CXCL6P80162 114 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 ELOCQ15369 112 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 OCIAD2Q56VL3 154 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 DNAJC24Q6P3W2 148 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 Q6ZS49 121 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 RNF165Q6ZSG1 346 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 CAMK2N1Q7Z7J9 78 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF584Q8IVC4 421 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 EXOC3-AS1Q8N2X6 119 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF664Q8N3J9 261 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 KRTCAP2Q8N6L1 136 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 Q8NBF4 154 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 ZNF555Q8NEP9 628 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 OR5H2Q8NGV7 314 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 C7orf33Q8WU49 177 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 IGF2BP2-AS1Q96M15 143 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 CCL13Q99616 98 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 NDFIP1Q9BT67 221 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 THTPAQ9BU02 230 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 SMIM3Q9BZL3 60 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 OR8D2Q9GZM6 311 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 CACYBPQ9HB71 228 aaKnown RBP2.72□□□□□ -1.97
SF3B1-205ENST00000424674 SDF2L1Q9HCN8 221 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 NIT2Q9NQR4 276 aa2.72□□□□□ -1.97
SF3B1-205ENST00000424674 TAC3Q9UHF0 121 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms