RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 TBC1D24Q9ULP9 559 aa13.56□□□□□ -0.24
COL7A1-202ENST00000422991 GPR132Q9UNW8 380 aa13.56□□□□□ -0.24
COL7A1-202ENST00000422991 VSIG4Q9Y279 399 aa13.56□□□□□ -0.24
COL7A1-202ENST00000422991 MOB4Q9Y3A3 225 aa13.56□□□□□ -0.24
COL7A1-202ENST00000422991 FCGR3BO75015 233 aa13.55□□□□□ -0.24
COL7A1-202ENST00000422991 KIR2DS2P43631 304 aa13.55□□□□□ -0.24
COL7A1-202ENST00000422991 CCR6P51684 374 aa13.55□□□□□ -0.24
COL7A1-202ENST00000422991 PIGPP57054 158 aa13.55□□□□□ -0.24
COL7A1-202ENST00000422991 CBX3Q13185 183 aa13.55□□□□□ -0.24
COL7A1-202ENST00000422991 ASAH1Q13510 395 aa13.55□□□□□ -0.24
COL7A1-202ENST00000422991 TMEM177Q53S58 311 aa13.55□□□□□ -0.24
COL7A1-202ENST00000422991 DHRS7BQ6IAN0 325 aaPredicted RBP13.55□□□□□ -0.24
COL7A1-202ENST00000422991 TBC1D26Q86UD7 250 aa13.55□□□□□ -0.24
COL7A1-202ENST00000422991 OR8H1Q8NGG4 311 aa13.55□□□□□ -0.24
COL7A1-202ENST00000422991 RTBDNQ9BSG5 229 aaPredicted RBP13.55□□□□□ -0.24
COL7A1-202ENST00000422991 C5orf66Q9H5L9 145 aa13.55□□□□□ -0.24
COL7A1-202ENST00000422991 PLSCR3Q9NRY6 295 aa13.55□□□□□ -0.24
COL7A1-202ENST00000422991 C14orf166Q9Y224 244 aaKnown RBP13.55□□□□□ -0.24
COL7A1-202ENST00000422991 STAB1Q9NY15 2570 aa13.54□□□□□ -0.24
COL7A1-202ENST00000422991 RBFOX2O43251 390 aaKnown RBP eCLIP13.54□□□□□ -0.24
COL7A1-202ENST00000422991 CRYZL1O95825 349 aa13.54□□□□□ -0.24
COL7A1-202ENST00000422991 CNTFRP26992 372 aa13.54□□□□□ -0.24
COL7A1-202ENST00000422991 F2RL1P55085 397 aa13.54□□□□□ -0.24
COL7A1-202ENST00000422991 RBMS2Q15434 407 aaKnown RBP13.54□□□□□ -0.24
COL7A1-202ENST00000422991 CCDC71LQ8N9Z2 235 aa13.54□□□□□ -0.24
COL7A1-202ENST00000422991 OR4C13Q8NGP0 309 aa13.54□□□□□ -0.24
COL7A1-202ENST00000422991 OR4S2Q8NH73 311 aa13.54□□□□□ -0.24
COL7A1-202ENST00000422991 FLYWCH2Q96CP2 140 aaKnown RBP13.54□□□□□ -0.24
COL7A1-202ENST00000422991 SCGB3A2Q96PL1 93 aa13.54□□□□□ -0.24
COL7A1-202ENST00000422991 RNF5Q99942 180 aa13.54□□□□□ -0.24
COL7A1-202ENST00000422991 SLC25A21Q9BQT8 299 aaPredicted RBP13.54□□□□□ -0.24
COL7A1-202ENST00000422991 LIN7CQ9NUP9 197 aaKnown RBP13.54□□□□□ -0.24
COL7A1-202ENST00000422991 M0QZK8 103 aa13.53□□□□□ -0.24
COL7A1-202ENST00000422991 MPPED1O15442 326 aa13.53□□□□□ -0.24
COL7A1-202ENST00000422991 FGF16O43320 207 aa13.53□□□□□ -0.24
COL7A1-202ENST00000422991 RAMP3O60896 148 aa13.53□□□□□ -0.24
COL7A1-202ENST00000422991 AMY1AP04745 511 aa13.53□□□□□ -0.24
COL7A1-202ENST00000422991 F2RP25116 425 aa13.53□□□□□ -0.24
COL7A1-202ENST00000422991 MMDQ15546 238 aa13.53□□□□□ -0.24
COL7A1-202ENST00000422991 KRTAP24-1Q3LI83 254 aa13.53□□□□□ -0.24
COL7A1-202ENST00000422991 SPAG16Q8N0X2 631 aa13.53□□□□□ -0.24
COL7A1-202ENST00000422991 TCTEX1D1Q8N7M0 179 aa13.53□□□□□ -0.24
COL7A1-202ENST00000422991 C5orf56Q8N8D9 126 aa13.53□□□□□ -0.24
COL7A1-202ENST00000422991 NPBQ8NG41 125 aa13.53□□□□□ -0.24
COL7A1-202ENST00000422991 HARBI1Q96MB7 349 aa13.53□□□□□ -0.24
COL7A1-202ENST00000422991 TSNAXQ99598 290 aaKnown RBP13.53□□□□□ -0.24
COL7A1-202ENST00000422991 COPZ2Q9P299 210 aa13.53□□□□□ -0.24
COL7A1-202ENST00000422991 NCBP2LA6PVI3 153 aaKnown RBP13.52□□□□□ -0.25
COL7A1-202ENST00000422991 NBR2O15453 112 aa13.52□□□□□ -0.25
COL7A1-202ENST00000422991 PEX14O75381 377 aa13.52□□□□□ -0.25
COL7A1-202ENST00000422991 NDUFB6O95139 128 aa13.52□□□□□ -0.25
COL7A1-202ENST00000422991 NDUFA3O95167 84 aa13.52□□□□□ -0.25
COL7A1-202ENST00000422991 SPDEFO95238 335 aa13.52□□□□□ -0.25
COL7A1-202ENST00000422991 VSIG10L2P0DP72 767 aa13.52□□□□□ -0.25
COL7A1-202ENST00000422991 RPS16P62249 146 aaKnown RBP13.52□□□□□ -0.25
COL7A1-202ENST00000422991 C11orf88Q6PI97 169 aa13.52□□□□□ -0.25
COL7A1-202ENST00000422991 FAM71E2Q8N5Q1 922 aa13.52□□□□□ -0.25
COL7A1-202ENST00000422991 Q8N9W7 124 aa13.52□□□□□ -0.25
COL7A1-202ENST00000422991 POC5Q8NA72 575 aa13.52□□□□□ -0.25
COL7A1-202ENST00000422991 OSR1Q8TAX0 266 aaPredicted RBP13.52□□□□□ -0.25
COL7A1-202ENST00000422991 CD300LFQ8TDQ1 290 aa13.52□□□□□ -0.25
COL7A1-202ENST00000422991 NPFFR1Q9GZQ6 430 aa13.52□□□□□ -0.25
COL7A1-202ENST00000422991 C1RLQ9NZP8 487 aa13.52□□□□□ -0.25
COL7A1-202ENST00000422991 H0Y980 276 aa13.51□□□□□ -0.25
COL7A1-202ENST00000422991 SHOXO15266 292 aa13.51□□□□□ -0.25
COL7A1-202ENST00000422991 IGLV2-23P01705 113 aa13.51□□□□□ -0.25
COL7A1-202ENST00000422991 CRYBA1P05813 215 aa13.51□□□□□ -0.25
COL7A1-202ENST00000422991 SLC6A1P30531 599 aa13.51□□□□□ -0.25
COL7A1-202ENST00000422991 LGALS7P47929 136 aa13.51□□□□□ -0.25
COL7A1-202ENST00000422991 RELBQ01201 579 aa13.51□□□□□ -0.25
COL7A1-202ENST00000422991 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.51□□□□□ -0.25
COL7A1-202ENST00000422991 ADAD2Q8NCV1 583 aaKnown RBP13.51□□□□□ -0.25
COL7A1-202ENST00000422991 TMEM230Q96A57 120 aa13.51□□□□□ -0.25
COL7A1-202ENST00000422991 RANBP3Q9H6Z4 567 aaPredicted RBP13.51□□□□□ -0.25
COL7A1-202ENST00000422991 FAM212BQ9NTI7 297 aaPredicted RBP13.51□□□□□ -0.25
COL7A1-202ENST00000422991 TENM1Q9UKZ4 2725 aa13.5□□□□□ -0.25
COL7A1-202ENST00000422991 CRYM-AS1A6NIL9 109 aa13.5□□□□□ -0.25
COL7A1-202ENST00000422991 SRRM4A7MD48 611 aaKnown RBP13.5□□□□□ -0.25
COL7A1-202ENST00000422991 RRHO14718 337 aa13.5□□□□□ -0.25
COL7A1-202ENST00000422991 S1PR2O95136 353 aa13.5□□□□□ -0.25
COL7A1-202ENST00000422991 NDUFA7O95182 113 aa13.5□□□□□ -0.25
COL7A1-202ENST00000422991 PSG5Q15238 335 aa13.5□□□□□ -0.25
COL7A1-202ENST00000422991 C5orf64Q2M2E5 130 aa13.5□□□□□ -0.25
COL7A1-202ENST00000422991 ZNF585BQ52M93 769 aa13.5□□□□□ -0.25
COL7A1-202ENST00000422991 MZT2BQ6NZ67 158 aa13.5□□□□□ -0.25
COL7A1-202ENST00000422991 TAF15Q92804 592 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL7A1-202ENST00000422991 TP53RKQ96S44 253 aa13.5□□□□□ -0.25
COL7A1-202ENST00000422991 C19orf24Q9BVV8 132 aa13.5□□□□□ -0.25
COL7A1-202ENST00000422991 NAA60Q9H7X0 242 aa13.5□□□□□ -0.25
COL7A1-202ENST00000422991 ZNF702PQ9H963 129 aa13.5□□□□□ -0.25
COL7A1-202ENST00000422991 PLEKHA2Q9HB19 425 aa13.5□□□□□ -0.25
COL7A1-202ENST00000422991 KIAA1456Q9P272 454 aa13.5□□□□□ -0.25
COL7A1-202ENST00000422991 C3orf85A0A1B0GTC6 90 aa13.49□□□□□ -0.25
COL7A1-202ENST00000422991 SLC25A17O43808 307 aa13.49□□□□□ -0.25
COL7A1-202ENST00000422991 TSPAN9O75954 239 aa13.49□□□□□ -0.25
COL7A1-202ENST00000422991 HPRT1P00492 218 aa13.49□□□□□ -0.25
COL7A1-202ENST00000422991 BLCAPP62952 87 aa13.49□□□□□ -0.25
COL7A1-202ENST00000422991 Q6ZSV7 163 aa13.49□□□□□ -0.25
COL7A1-202ENST00000422991 TMED4Q7Z7H5 227 aa13.49□□□□□ -0.25
COL7A1-202ENST00000422991 Q8N2B8 174 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms