RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 GAL3ST2Q9H3Q3 398 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 ONECUT1Q9UBC0 465 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 KCNS2Q9ULS6 477 aa7.31□□□□□ -1.24
HPS4-204ENST00000422379 RBM7Q9Y580 266 aaKnown RBP7.31□□□□□ -1.24
HPS4-204ENST00000422379 HIVEP1P15822 2718 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 IGHV2-70DA0A0C4DH43 119 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 DUXBA0A1W2PPF3 345 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 E5RGE8 158 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 TEX46H3BTG2 121 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 ST8SIA3O43173 380 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 YPEL1O60688 119 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 CRYZL1O95825 349 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 MMP9P14780 707 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 USF1P22415 310 aaPredicted RBP7.3□□□□□ -1.24
HPS4-204ENST00000422379 DSCR9P59020 149 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 KLRD1Q13241 179 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 DIAPH2-AS1Q14236 149 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 CCDC28AQ8IWP9 274 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 BAP18Q8IXM2 172 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 PNKDQ8N490 385 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 DRAM1Q8N682 238 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 IL22RA2Q969J5 263 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 AKR1E2Q96JD6 320 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 Q96MF0 132 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 YPEL2Q96QA6 119 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 ZNF251Q9BRH9 671 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 REG4Q9BYZ8 158 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 OR2D2Q9H210 308 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 ZC4H2Q9NQZ6 224 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 SIRT7Q9NRC8 400 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 MED9Q9NWA0 146 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 LPAR3Q9UBY5 353 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 RCL1Q9Y2P8 373 aaKnown RBP7.3□□□□□ -1.24
HPS4-204ENST00000422379 TMA7Q9Y2S6 64 aaKnown RBP7.3□□□□□ -1.24
HPS4-204ENST00000422379 NSG2Q9Y328 171 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 POMT1Q9Y6A1 747 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 CUBNO60494 3623 aa7.3□□□□□ -1.24
HPS4-204ENST00000422379 CR1P17927 2039 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 A0A087X0M5 115 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 A0A1B0GX30 115 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 I3L521 148 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 LIPFP07098 398 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 SLC25A16P16260 332 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 VDAC1P21796 283 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 BRWD1-AS2P59051 145 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 RPL30P62888 115 aaKnown RBP7.29□□□□□ -1.24
HPS4-204ENST00000422379 RPL39P5Q59GN2 51 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 RPL7L1Q6DKI1 246 aaKnown RBP7.29□□□□□ -1.24
HPS4-204ENST00000422379 DMBX1Q8NFW5 382 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 RAB39BQ96DA2 213 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 SPIN2AQ99865 258 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 SPIN2BQ9BPZ2 258 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 SIRPDQ9H106 197 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 ZFP57Q9NU63 452 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 SDHAF2Q9NX18 166 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 FBXL17Q9UF56 701 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 POLR3KQ9Y2Y1 108 aaPredicted RBP7.29□□□□□ -1.24
HPS4-204ENST00000422379 PIGBOS1A0A0B4J2F0 54 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 A0A0G2JRQ6 117 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 MFSD2BA6NFX1 497 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 TAAR5O14804 337 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 IGKV1-39P01597 117 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 IGKV1D-39P04432 117 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 SERPINE2P07093 398 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 PAX6P26367 422 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 BTNL3Q6UXE8 466 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 SLC25A48Q6ZT89 311 aaKnown RBP7.29□□□□□ -1.24
HPS4-204ENST00000422379 TMED6Q8WW62 240 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 C1orf159Q96HA4 380 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 TBX15Q96SF7 602 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 ABHD14AQ9BUJ0 271 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 TMEM133Q9H2Q1 129 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 C11orf1Q9H5F2 150 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 PLEKHA2Q9HB19 425 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 PFDN2Q9UHV9 154 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 SESN1Q9Y6P5 492 aa7.29□□□□□ -1.24
HPS4-204ENST00000422379 SAA2-SAA4A0A096LPE2 208 aa7.28□□□□□ -1.24
HPS4-204ENST00000422379 IGHV2-26A0A0B4J1V2 119 aa7.28□□□□□ -1.24
HPS4-204ENST00000422379 LINC00473A8K010 186 aa7.28□□□□□ -1.24
HPS4-204ENST00000422379 RNASEK-C17orf49H0YIS7 233 aa7.28□□□□□ -1.24
HPS4-204ENST00000422379 ENSAO43768 121 aaKnown RBP7.28□□□□□ -1.24
HPS4-204ENST00000422379 IGLV1-47P01700 117 aa7.28□□□□□ -1.24
HPS4-204ENST00000422379 SAA2P0DJI9 122 aaPredicted RBP7.28□□□□□ -1.24
HPS4-204ENST00000422379 COX7A1P24310 79 aa7.28□□□□□ -1.24
HPS4-204ENST00000422379 NKX2-1P43699 371 aaPredicted RBP7.28□□□□□ -1.24
HPS4-204ENST00000422379 P2RY1P47900 373 aa7.28□□□□□ -1.24
HPS4-204ENST00000422379 POLR2GP62487 172 aaKnown RBP eCLIP7.28□□□□□ -1.24
HPS4-204ENST00000422379 CXorf66Q5JRM2 361 aaPredicted RBP7.28□□□□□ -1.24
HPS4-204ENST00000422379 PRSS57Q6UWY2 283 aa7.28□□□□□ -1.24
HPS4-204ENST00000422379 CLEC9AQ6UXN8 241 aa7.28□□□□□ -1.24
HPS4-204ENST00000422379 ABHD12Q8N2K0 398 aa7.28□□□□□ -1.24
HPS4-204ENST00000422379 ZNF645Q8N7E2 425 aa7.28□□□□□ -1.24
HPS4-204ENST00000422379 OR10A7Q8NGE5 316 aa7.28□□□□□ -1.24
HPS4-204ENST00000422379 BSCL2Q96G97 398 aaPredicted RBP7.28□□□□□ -1.24
HPS4-204ENST00000422379 SMIM3Q9BZL3 60 aa7.28□□□□□ -1.24
HPS4-204ENST00000422379 LIN7CQ9NUP9 197 aaKnown RBP7.28□□□□□ -1.24
HPS4-204ENST00000422379 INSIG2Q9Y5U4 225 aa7.28□□□□□ -1.24
HPS4-204ENST00000422379 SONP18583 2426 aaKnown RBP7.28□□□□□ -1.24
HPS4-204ENST00000422379 ABCA1O95477 2261 aa7.28□□□□□ -1.24
HPS4-204ENST00000422379 J3QR06 171 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms