RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 SLC9A3R2Q15599 337 aa12.57□□□□□ -0.4
DDX55-203ENST00000421670 OR2T10Q8NGZ9 312 aa12.57□□□□□ -0.4
DDX55-203ENST00000421670 OR5R1Q8NH85 324 aa12.57□□□□□ -0.4
DDX55-203ENST00000421670 TP53RKQ96S44 253 aa12.57□□□□□ -0.4
DDX55-203ENST00000421670 CHIAQ9BZP6 476 aa12.57□□□□□ -0.4
DDX55-203ENST00000421670 NAA60Q9H7X0 242 aa12.57□□□□□ -0.4
DDX55-203ENST00000421670 VPREB3Q9UKI3 123 aa12.57□□□□□ -0.4
DDX55-203ENST00000421670 TEX13DA0A0J9YY54 714 aaPredicted RBP12.56□□□□□ -0.4
DDX55-203ENST00000421670 C3orf85A0A1B0GTC6 90 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 CNTFRP26992 372 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 HILS1P60008 231 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 SUPT4H1P63272 117 aaKnown RBP12.56□□□□□ -0.4
DDX55-203ENST00000421670 TAGLNQ01995 201 aaKnown RBP12.56□□□□□ -0.4
DDX55-203ENST00000421670 EBI3Q14213 229 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 SP6Q3SY56 376 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 OR4S2Q8NH73 311 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 BEX1Q9HBH7 125 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 POMT1Q9Y6A1 747 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 A6NDX4 124 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 H0Y980 276 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 CHST1O43916 411 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 PTTG1O95997 202 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 OR5AC1P0C628 307 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 VSIG10L2P0DP72 767 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 RAB25P57735 213 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 CBX3Q13185 183 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 THNSL2Q86YJ6 484 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 Q8N6K4 173 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 DUSP18Q8NEJ0 188 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 OR4C13Q8NGP0 309 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 FLYWCH2Q96CP2 140 aaKnown RBP12.56□□□□□ -0.4
DDX55-203ENST00000421670 HARBI1Q96MB7 349 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 PRR13Q9NZ81 148 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 NUBP2Q9Y5Y2 271 aa12.56□□□□□ -0.4
DDX55-203ENST00000421670 S1PR2O95136 353 aa12.55□□□□□ -0.4
DDX55-203ENST00000421670 H2AFB2P0C5Z0 115 aa12.55□□□□□ -0.4
DDX55-203ENST00000421670 RRASP10301 218 aa12.55□□□□□ -0.4
DDX55-203ENST00000421670 VAMP1P23763 118 aa12.55□□□□□ -0.4
DDX55-203ENST00000421670 KIR2DS2P43631 304 aa12.55□□□□□ -0.4
DDX55-203ENST00000421670 F2RL1P55085 397 aa12.55□□□□□ -0.4
DDX55-203ENST00000421670 SRSF2Q01130 221 aaKnown RBP12.55□□□□□ -0.4
DDX55-203ENST00000421670 PPP1R1AQ13522 171 aa12.55□□□□□ -0.4
DDX55-203ENST00000421670 MMDQ15546 238 aa12.55□□□□□ -0.4
DDX55-203ENST00000421670 ZNF585BQ52M93 769 aa12.55□□□□□ -0.4
DDX55-203ENST00000421670 TMEM128Q5BJH2 165 aa12.55□□□□□ -0.4
DDX55-203ENST00000421670 SLC25A42Q86VD7 318 aa12.55□□□□□ -0.4
DDX55-203ENST00000421670 SGPP2Q8IWX5 399 aa12.55□□□□□ -0.4
DDX55-203ENST00000421670 SLC25A33Q9BSK2 321 aa12.55□□□□□ -0.4
DDX55-203ENST00000421670 PITPNC1Q9UKF7 332 aa12.55□□□□□ -0.4
DDX55-203ENST00000421670 PLXNB1O43157 2135 aa12.54□□□□□ -0.4
DDX55-203ENST00000421670 SHOXO15266 292 aa12.54□□□□□ -0.4
DDX55-203ENST00000421670 RBFOX2O43251 390 aaKnown RBP eCLIP12.54□□□□□ -0.4
DDX55-203ENST00000421670 TCF21O43680 179 aa12.54□□□□□ -0.4
DDX55-203ENST00000421670 TAS2R31P59538 309 aa12.54□□□□□ -0.4
DDX55-203ENST00000421670 RPS16P62249 146 aaKnown RBP12.54□□□□□ -0.4
DDX55-203ENST00000421670 RGS21Q2M5E4 152 aa12.54□□□□□ -0.4
DDX55-203ENST00000421670 TMEM177Q53S58 311 aa12.54□□□□□ -0.4
DDX55-203ENST00000421670 DHRS7BQ6IAN0 325 aaPredicted RBP12.54□□□□□ -0.4
DDX55-203ENST00000421670 PLET1Q6UQ28 207 aa12.54□□□□□ -0.4
DDX55-203ENST00000421670 TMEM86BQ8N661 226 aa12.54□□□□□ -0.4
DDX55-203ENST00000421670 RBM14Q96PK6 669 aaKnown RBP12.54□□□□□ -0.4
DDX55-203ENST00000421670 C2CD3Q4AC94 2353 aa12.53□□□□□ -0.4
DDX55-203ENST00000421670 NCBP2LA6PVI3 153 aaKnown RBP12.53□□□□□ -0.4
DDX55-203ENST00000421670 SRRM4A7MD48 611 aaKnown RBP12.53□□□□□ -0.4
DDX55-203ENST00000421670 OR2F2O95006 317 aa12.53□□□□□ -0.4
DDX55-203ENST00000421670 HLA-AP01891 365 aaKnown RBP12.53□□□□□ -0.4
DDX55-203ENST00000421670 OR4E1P0C645 316 aa12.53□□□□□ -0.4
DDX55-203ENST00000421670 LPAR6P43657 344 aa12.53□□□□□ -0.4
DDX55-203ENST00000421670 VKORC1L1Q8N0U8 176 aa12.53□□□□□ -0.4
DDX55-203ENST00000421670 CD300LFQ8TDQ1 290 aa12.53□□□□□ -0.4
DDX55-203ENST00000421670 GPR137BO60478 399 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 HPRT1P00492 218 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 IGKV1-39P01597 117 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 IGLV2-23P01705 113 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 IGKV1D-39P04432 117 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 SERPINE2P07093 398 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 RPA2P15927 270 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 UBA52P62987 128 aaKnown RBP12.52□□□□□ -0.4
DDX55-203ENST00000421670 DHODHQ02127 395 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 TRIM16LQ309B1 348 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 C4orf46Q504U0 113 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 SSX9Q7RTT3 188 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 LURAP1LQ8IV03 231 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 TCTEX1D1Q8N7M0 179 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 OR52B4Q8NGK2 314 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 LHFPL5Q8TAF8 219 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 OSR1Q8TAX0 266 aaPredicted RBP12.52□□□□□ -0.4
DDX55-203ENST00000421670 CASTOR1Q8WTX7 329 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 GLYATL2Q8WU03 294 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 GALNT14Q96FL9 552 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 JMJD8Q96S16 334 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 TMEM222Q9H0R3 208 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 PLSCR3Q9NRY6 295 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 MOB4Q9Y3A3 225 aa12.52□□□□□ -0.4
DDX55-203ENST00000421670 TNCP24821 2201 aa12.52□□□□□ -0.41
DDX55-203ENST00000421670 CLDN34H7C241 214 aa12.52□□□□□ -0.41
DDX55-203ENST00000421670 NBR2O15453 112 aa12.52□□□□□ -0.41
DDX55-203ENST00000421670 SLC25A17O43808 307 aa12.52□□□□□ -0.41
DDX55-203ENST00000421670 IFNA2P01563 188 aa12.52□□□□□ -0.41
DDX55-203ENST00000421670 UCP1P25874 307 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms