RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 S100A7P31151 101 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 WDR73Q6P4I2 378 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 Q8N7P7 452 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 LMX1AQ8TE12 382 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 RPP25Q9BUL9 199 aaKnown RBP6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 NAT8BQ9UHF3 227 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 RBM7Q9Y580 266 aaKnown RBP6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 CEP290O15078 2479 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 TRAV9-2A0A087WT02 112 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 TRBV6-6A0A0A6YYG2 114 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 LILRA5A6NI73 299 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 ZNF891A8MT65 544 aaPredicted RBP6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 PSG1P11464 419 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 FKBP2P26885 142 aaKnown RBP6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 SRD5A2P31213 254 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 GABRA2P47869 451 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 CARD18P57730 90 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 RHOBP62745 196 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 SHISA6Q6ZSJ9 500 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 VASH2Q86V25 355 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 FGFRL1Q8N441 504 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 LRRC61Q9BV99 259 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 IL36RNQ9UBH0 155 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 PPP1R3CQ9UQK1 317 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 CELSR3Q9NYQ7 3312 aa6.75□□□□□ -1.33
HMGXB4-202ENST00000418170 TRAV38-1A0A0B4J264 116 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 ZNF16P17020 682 aaPredicted RBP6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 OR2M7Q8NG81 312 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 OR5A2Q8NGI9 324 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 BORCS7Q96B45 105 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 METTL7AQ9H8H3 244 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 DIDO1Q9BTC0 2240 aaKnown RBP6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 NPIPB11E5RHQ5 1161 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 NPIPA2E9PIF3 369 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 NPIPA3F8WFD2 350 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 FOXL2P58012 376 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 WDR74Q6RFH5 385 aaPredicted RBP6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 OR8I2Q8N0Y5 310 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 NFAM1Q8NET5 270 aaPredicted RBP6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 OR10G3Q8NGC4 313 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 OR1L3Q8NH93 324 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 TSKUQ8WUA8 353 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 SMIM12Q96EX1 92 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 CLEC7AQ9BXN2 247 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 CD207Q9UJ71 328 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 GTF3C1Q12789 2109 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 CNTRLQ7Z7A1 2325 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 K7ERU9 68 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 GLB1P16278 677 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 HTD2P86397 168 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 COX19Q49B96 90 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 GCSAMLQ5JQS6 135 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 LCN12Q6JVE5 192 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 TMEM136Q6ZRR5 245 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 OR1A1Q9P1Q5 309 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 LY96Q9Y6Y9 160 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 V9GYV3 84 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 A0A1W2PPV4 95 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 H0YJW9 148 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 SIRPB1O00241 398 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 TAX1BP3O14907 124 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 CX3CL1P78423 397 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 FAM19A2Q8N3H0 131 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 CLEC1BQ9P126 229 aa6.74□□□□□ -1.33
HMGXB4-202ENST00000418170 KIAA1549Q9HCM3 1950 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 ADAMTS20P59510 1910 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 BSNQ9UPA5 3926 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 C9JCJ5 164 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 VAMP5O95183 116 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 IGHV4-34P06331 123 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 ARL14EPLP0DKL9 152 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 IGLL1P15814 213 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 ZNF32P17041 273 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 TGFBR3Q03167 851 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 KIAA1644Q3SXP7 199 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 PRR27Q6MZM9 219 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 BCL2L2Q92843 193 aaPredicted RBP6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 RPH3ALQ9UNE2 315 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 LAMA5O15230 3695 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 CEP192Q8TEP8 1941 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 IGHV3-15A0A0B4J1V0 119 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 BMPR1BO00238 502 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 SRIP30626 198 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 OR4A47Q6IF82 309 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 IL1F10Q8WWZ1 152 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 HES4Q9HCC6 221 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 EML6Q6ZMW3 1958 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 TNRC6BQ9UPQ9 1833 aaKnown RBP6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 A0A1B0GX78 115 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 TOX4O94842 621 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 CA3P07451 260 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 RPL31P62899 125 aaKnown RBP6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 HYAL1Q12794 435 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 ERASQ7Z444 233 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 SPSB4Q96A44 273 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 UCN2Q96RP3 112 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 TMEM204Q9BSN7 226 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 MTCH1Q9NZJ7 389 aa6.73□□□□□ -1.33
HMGXB4-202ENST00000418170 WDR83OSQ9Y284 106 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms