RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 RGS21Q2M5E4 152 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 VMA21Q3ZAQ7 101 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 C9orf152Q5JTZ5 239 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 LDLRAD2Q5SZI1 272 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 TMEM219Q86XT9 240 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 TMEM86BQ8N661 226 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 TCTEX1D1Q8N7M0 179 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 ZNF383Q8NA42 475 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 DMBX1Q8NFW5 382 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 OR4C13Q8NGP0 309 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 CFHR4Q92496 578 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 C5orf30Q96GV9 206 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 ZNF48Q96MX3 618 aaPredicted RBP6.81□□□□□ -1.32
TRIM48-201ENST00000417545 TSNAXQ99598 290 aaKnown RBP6.81□□□□□ -1.32
TRIM48-201ENST00000417545 RASL11BQ9BPW5 248 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 NAA60Q9H7X0 242 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 GPR132Q9UNW8 380 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 TCF19Q9Y242 345 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 VSIG4Q9Y279 399 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 MOB4Q9Y3A3 225 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 F8P00451 2351 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 CSPG4Q6UVK1 2322 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 A0A0A6YYJ9 748 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 PIGBOS1A0A0B4J2F0 54 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 C3orf85A0A1B0GTC6 90 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 LINC00473A8K010 186 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 H0Y980 276 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 NBR2O15453 112 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 B3GALNT1O75752 331 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 PTTG1O95997 202 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 DHFRP00374 187 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 F2RP25116 425 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 SLC6A1P30531 599 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 LPAR6P43657 344 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 AKR1C2P52895 323 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 RAB25P57735 213 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 HILS1P60008 231 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 SRPXP78539 464 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 IFITM3Q01628 133 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 DHODHQ02127 395 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 SLC9A3R2Q15599 337 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 C16orf82Q7Z2V1 217 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 THNSL2Q86YJ6 484 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 ZNF695Q8IW36 515 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 ADAD2Q8NCV1 583 aaKnown RBP6.8□□□□□ -1.32
TRIM48-201ENST00000417545 OR5AN1Q8NGI8 311 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 OSR1Q8TAX0 266 aaPredicted RBP6.8□□□□□ -1.32
TRIM48-201ENST00000417545 CASTOR1Q8WTX7 329 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 EAF1Q96JC9 268 aaPredicted RBP6.8□□□□□ -1.32
TRIM48-201ENST00000417545 C5orf66Q9H5L9 145 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 BEX1Q9HBH7 125 aa6.8□□□□□ -1.32
TRIM48-201ENST00000417545 ZANQ9Y493 2812 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 CRYM-AS1A6NIL9 109 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 M0QZK8 103 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 CREBL2O60519 120 aaPredicted RBP6.79□□□□□ -1.32
TRIM48-201ENST00000417545 RBMXL2O75526 392 aaKnown RBP6.79□□□□□ -1.32
TRIM48-201ENST00000417545 OR2F2O95006 317 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 HPRT1P00492 218 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 IGLV2-14P01704 120 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 HLA-AP01891 365 aaKnown RBP6.79□□□□□ -1.32
TRIM48-201ENST00000417545 OR5AC1P0C628 307 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 NQO2P16083 231 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 BTCP35070 178 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 LINC00205P59089 165 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 UBE2MP61081 183 aaKnown RBP6.79□□□□□ -1.32
TRIM48-201ENST00000417545 RPL30P62888 115 aaKnown RBP6.79□□□□□ -1.32
TRIM48-201ENST00000417545 TMEM128Q5BJH2 165 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 SSX9Q7RTT3 188 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 NRARPQ7Z6K4 114 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 OR8H1Q8NGG4 311 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 VSTM2AQ8TAG5 236 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 ABHD5Q8WTS1 349 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 R3HDM4Q96D70 268 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 RRNAD1Q96FB5 475 aaKnown RBP6.79□□□□□ -1.32
TRIM48-201ENST00000417545 AJUBAQ96IF1 538 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 RTBDNQ9BSG5 229 aaPredicted RBP6.79□□□□□ -1.32
TRIM48-201ENST00000417545 CHIAQ9BZP6 476 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 NPFFR1Q9GZQ6 430 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 GPN1Q9HCN4 374 aaPredicted RBP6.79□□□□□ -1.32
TRIM48-201ENST00000417545 METTL1Q9UBP6 276 aaKnown RBP6.79□□□□□ -1.32
TRIM48-201ENST00000417545 FLVCR2Q9UPI3 526 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 HIVEP1P15822 2718 aa6.79□□□□□ -1.32
TRIM48-201ENST00000417545 A6NDX4 124 aa6.78□□□□□ -1.32
TRIM48-201ENST00000417545 RBFOX2O43251 390 aaKnown RBP eCLIP6.78□□□□□ -1.32
TRIM48-201ENST00000417545 SLC25A17O43808 307 aa6.78□□□□□ -1.32
TRIM48-201ENST00000417545 GPR137BO60478 399 aa6.78□□□□□ -1.32
TRIM48-201ENST00000417545 PROP1O75360 226 aa6.78□□□□□ -1.32
TRIM48-201ENST00000417545 ACTL6BO94805 426 aa6.78□□□□□ -1.32
TRIM48-201ENST00000417545 S1PR2O95136 353 aa6.78□□□□□ -1.32
TRIM48-201ENST00000417545 SPDEFO95238 335 aa6.78□□□□□ -1.32
TRIM48-201ENST00000417545 IGKV1-16P04430 117 aa6.78□□□□□ -1.32
TRIM48-201ENST00000417545 RPA2P15927 270 aa6.78□□□□□ -1.32
TRIM48-201ENST00000417545 ANXA7P20073 488 aaKnown RBP6.78□□□□□ -1.32
TRIM48-201ENST00000417545 LGALS7P47929 136 aa6.78□□□□□ -1.32
TRIM48-201ENST00000417545 GNB1P62873 340 aa6.78□□□□□ -1.32
TRIM48-201ENST00000417545 UBA52P62987 128 aaKnown RBP6.78□□□□□ -1.32
TRIM48-201ENST00000417545 HABP2Q14520 560 aaPredicted RBP6.78□□□□□ -1.32
TRIM48-201ENST00000417545 SP6Q3SY56 376 aa6.78□□□□□ -1.32
TRIM48-201ENST00000417545 TMEM177Q53S58 311 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms