RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 HSD17B10Q99714 261 aaKnown RBP8.2□□□□□ -1.1
CD44-206ENST00000415148 NPCDR1Q9BY65 106 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 URB1O60287 2271 aaKnown RBP8.19□□□□□ -1.1
CD44-206ENST00000415148 PGPEP1LA6NFU8 196 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 FAM90A9PA6NNJ1 464 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 PSPNO60542 156 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 GCGP01275 180 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 HBZP02008 142 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 CD99P14209 185 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 CD46P15529 392 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 UBE2NP61088 152 aaKnown RBP8.19□□□□□ -1.1
CD44-206ENST00000415148 PMP22Q01453 160 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 C3AR1Q16581 482 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 INO80CQ6PI98 192 aaPredicted RBP8.19□□□□□ -1.1
CD44-206ENST00000415148 C1orf210Q8IVY1 113 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 TMEM105Q8N8V8 129 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 OR4F5Q8NH21 305 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 SLC25A40Q8TBP6 338 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 RAB1CQ92928 201 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 RAB24Q969Q5 203 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 FER1L6-AS2Q96M78 137 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 OR4F4Q96R69 305 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 IMMP2LQ96T52 175 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 NDUFAF3Q9BU61 184 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 CLN8Q9UBY8 286 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 PDE6DO43924 150 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 ZG16O60844 167 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 S1PR2O95136 353 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 TNFSF15O95150 251 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 CRYAAP02489 173 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 GYPAP02724 150 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 GRPP07492 148 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 CHRNA7P36544 502 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 BRWD1-AS2P59051 145 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 LCN2P80188 198 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 PAX5Q02548 391 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 ZNF816Q0VGE8 651 aaPredicted RBP8.19□□□□□ -1.1
CD44-206ENST00000415148 PSG7Q13046 419 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 AARDQ4LEZ3 155 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 LBHQ53QV2 105 aaPredicted RBP8.19□□□□□ -1.1
CD44-206ENST00000415148 KCNIP4Q6PIL6 250 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 TRAT1Q6PIZ9 186 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 TMEM256Q8N2U0 113 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 DEFB123Q8N688 67 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 OR2T10Q8NGZ9 312 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 TXNDC17Q9BRA2 123 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 SNHG12Q9BXW3 62 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 CBLN4Q9NTU7 201 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 FOXJ2Q9P0K8 574 aa8.19□□□□□ -1.1
CD44-206ENST00000415148 TRGV5A0A0B4J1U4 118 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 C17orf98A8MV24 154 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 TCAPO15273 167 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 MPDU1O75352 247 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 TFF1P04155 84 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 FOSL1P15407 271 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 G0S2P27469 103 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 RPP30P78346 268 aaKnown RBP8.18□□□□□ -1.1
CD44-206ENST00000415148 GCSAMLQ5JQS6 135 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 ACTL10Q5JWF8 245 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 ZNF114Q8NC26 417 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 OR52L2PQ8NGH6 319 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 ZDHHC16Q969W1 377 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 DERL1Q9BUN8 251 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 CXXC4Q9H2H0 198 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 TP53TG5Q9Y2B4 290 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 TMPRSS2O15393 492 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 PAGE4O60829 102 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 PDGFBP01127 241 aaPredicted RBP8.18□□□□□ -1.1
CD44-206ENST00000415148 ADH4P08319 380 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 CEBPDP49716 269 aaPredicted RBP8.18□□□□□ -1.1
CD44-206ENST00000415148 NUTF2P61970 127 aaKnown RBP8.18□□□□□ -1.1
CD44-206ENST00000415148 HTD2P86397 168 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 ACP7Q6ZNF0 438 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 C11orf53Q8IXP5 236 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 NOL4LQ96MY1 436 aaPredicted RBP8.18□□□□□ -1.1
CD44-206ENST00000415148 OR6C3Q9NZP0 311 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 PRR14LQ5THK1 2151 aa8.18□□□□□ -1.1
CD44-206ENST00000415148 F6UZH7 168 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 MLNRO43193 412 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 CELA3BP08861 270 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 CDC34P49427 236 aaPredicted RBP8.17□□□□□ -1.1
CD44-206ENST00000415148 IDH3GP51553 393 aaPredicted RBP8.17□□□□□ -1.1
CD44-206ENST00000415148 SPCS3P61009 180 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 AESQ08117 197 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 TCF23Q7RTU1 214 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 KLF14Q8TD94 323 aaPredicted RBP8.17□□□□□ -1.1
CD44-206ENST00000415148 COQ2Q96H96 371 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 DEFB127Q9H1M4 99 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 CHODLQ9H9P2 273 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 WDR83OSQ9Y284 106 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 IGHV1-2P23083 117 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 CCKARP32238 428 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 ALKBH6Q3KRA9 238 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 ZNF808Q8N4W9 903 aaPredicted RBP8.17□□□□□ -1.1
CD44-206ENST00000415148 ZDHHC11Q9H8X9 412 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 OBP2BQ9NPH6 170 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 KCNIP2Q9NS61 270 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 SPRR3Q9UBC9 169 aa8.17□□□□□ -1.1
CD44-206ENST00000415148 POLR3KQ9Y2Y1 108 aaPredicted RBP8.17□□□□□ -1.1
CD44-206ENST00000415148 LOC400499M0QZD8 3231 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms