RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 PAGE4O60829 102 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 OPN1MWP04001 364 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 OPN1MW2P0DN77 364 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 OPN1MW3P0DN78 364 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 ATP5G3P48201 142 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 PDLIM4P50479 330 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 SLC10A1Q14973 349 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 TMEM241Q24JQ0 296 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 COA6Q5JTJ3 125 aaKnown RBP8.2□□□□□ -1.1
SS18-203ENST00000415083 FFAR4Q5NUL3 377 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 FAM90A1Q86YD7 464 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 RFESDQ8TAC1 157 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 PLPPR2Q96GM1 343 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 GPR87Q9BY21 358 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 SLC39A9Q9NUM3 307 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 CLCF1Q9UBD9 225 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 COLQQ9Y215 455 aaPredicted RBP8.2□□□□□ -1.1
SS18-203ENST00000415083 AKAP13Q12802 2813 aa8.2□□□□□ -1.1
SS18-203ENST00000415083 CRYAAP02489 173 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 CD82P27701 267 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 TBC1D28Q2M2D7 210 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 BSXQ3C1V8 233 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 SLC35E4Q6ICL7 350 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 TGIF2LXQ8IUE1 241 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 TMEM183AQ8IXX5 376 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 ZNF664Q8N3J9 261 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 DTD1Q8TEA8 209 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 PINX1Q96BK5 328 aaKnown RBP8.19□□□□□ -1.1
SS18-203ENST00000415083 CTDSP1Q9GZU7 261 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 RBM7Q9Y580 266 aaKnown RBP8.19□□□□□ -1.1
SS18-203ENST00000415083 TRAV38-1A0A0B4J264 116 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 CTXND1A0A1B0GTU2 59 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 SLC31A2O15432 143 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 RAC2P15153 192 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 ACTL10Q5JWF8 245 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 VKORC1L1Q8N0U8 176 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 DIRC2Q96SL1 478 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 KNTC1P50748 2209 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 A0A1W2PPQ1 181 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 XKRY2A2RUG3 117 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 C21orf140B9A014 251 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 RBFOX2O43251 390 aaKnown RBP eCLIP8.19□□□□□ -1.1
SS18-203ENST00000415083 GYPAP02724 150 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 MPLP40238 635 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 NUBP1P53384 320 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 RPL15P61313 204 aaKnown RBP8.19□□□□□ -1.1
SS18-203ENST00000415083 SSX2Q16385 188 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 AARDQ4LEZ3 155 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 VWA1Q6PCB0 445 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 ZNF66Q6ZN08 573 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 Q8IYB0 196 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 TMEM147Q9BVK8 224 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 MSL2Q9HCI7 577 aa8.19□□□□□ -1.1
SS18-203ENST00000415083 CLDN14O95500 239 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 IGKV3-15P01624 115 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 WT1P19544 449 aaPredicted RBP8.18□□□□□ -1.1
SS18-203ENST00000415083 S100GP29377 79 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 GALR1P47211 349 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 OR1P1Q8NH06 330 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 OR4F5Q8NH21 305 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 GALMQ96C23 342 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 OR4F4Q96R69 305 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 WASF3Q9UPY6 502 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 POLDIP2Q9Y2S7 368 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 INTS1Q8N201 2190 aaKnown RBP8.18□□□□□ -1.1
SS18-203ENST00000415083 TACC2O95359 2948 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 TRGV5A0A0B4J1U4 118 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 TMEM30CPA0ZSE6 113 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 TMEM250H0YL14 139 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 RAB29O14966 203 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 GGCTO75223 188 aaKnown RBP8.18□□□□□ -1.1
SS18-203ENST00000415083 IGHV3-13P01766 116 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 IGHV3-7P01780 117 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 JOSD1Q15040 202 aaPredicted RBP8.18□□□□□ -1.1
SS18-203ENST00000415083 Q3ZCU0 254 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 TMEM144Q7Z5S9 345 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 RNASEH2CQ8TDP1 164 aaKnown RBP8.18□□□□□ -1.1
SS18-203ENST00000415083 OR6C3Q9NZP0 311 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 CACNA1GO43497 2377 aa8.18□□□□□ -1.1
SS18-203ENST00000415083 IFNA10P01566 189 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 FRMD6-AS1P0C7T7 363 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 C1QTNF9P0C862 333 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 KIR2DL2P43627 348 aaPredicted RBP8.17□□□□□ -1.1
SS18-203ENST00000415083 FAM3BP58499 235 aaPredicted RBP8.17□□□□□ -1.1
SS18-203ENST00000415083 DNLZQ5SXM8 178 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 LINC01551Q86U37 167 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 MCEMP1Q8IX19 187 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.17□□□□□ -1.1
SS18-203ENST00000415083 PITPNC1Q9UKF7 332 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 A0A1B0GWJ7 208 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 OOEPA6NGQ2 149 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 MARCH11A6NNE9 402 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 SOX15O60248 233 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 ZNF883P0CG24 379 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 G0S2P27469 103 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 CASP6P55212 293 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 LINC00310P59036 64 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 SSTP61278 116 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 DHRS13Q6UX07 377 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 PRR7Q8TB68 274 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms