RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 GABRR1P24046 479 aa7.92□□□□□ -1.14
SNHG3-201ENST00000413987 RPL13AP40429 203 aaKnown RBP7.92□□□□□ -1.14
SNHG3-201ENST00000413987 SSR4P51571 173 aa7.92□□□□□ -1.14
SNHG3-201ENST00000413987 RAP1BP61224 184 aa7.92□□□□□ -1.14
SNHG3-201ENST00000413987 RPL32P62910 135 aaKnown RBP7.92□□□□□ -1.14
SNHG3-201ENST00000413987 H3F3AP84243 136 aa7.92□□□□□ -1.14
SNHG3-201ENST00000413987 UNC119Q13432 240 aa7.92□□□□□ -1.14
SNHG3-201ENST00000413987 GFI1BQ5VTD9 330 aa7.92□□□□□ -1.14
SNHG3-201ENST00000413987 SPINK14Q6IE38 97 aa7.92□□□□□ -1.14
SNHG3-201ENST00000413987 SGPP2Q8IWX5 399 aa7.92□□□□□ -1.14
SNHG3-201ENST00000413987 SLC25A43Q8WUT9 341 aaPredicted RBP7.92□□□□□ -1.14
SNHG3-201ENST00000413987 TMEM234Q8WY98 164 aa7.92□□□□□ -1.14
SNHG3-201ENST00000413987 HIST1H2BLQ99880 126 aa7.92□□□□□ -1.14
SNHG3-201ENST00000413987 NIPSNAP3BQ9BS92 247 aa7.92□□□□□ -1.14
SNHG3-201ENST00000413987 IL36GQ9NZH8 169 aa7.92□□□□□ -1.14
SNHG3-201ENST00000413987 ZNF727A8MUV8 499 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 TMEM14DPA8MWL7 114 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 K7EP13 123 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 HSD17B6O14756 317 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 RAMP1O60894 148 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 OR5AC1P0C628 307 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 GZMHP20718 246 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 C1QL3Q5VWW1 255 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 MOB3BQ86TA1 216 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 ZNF429Q86V71 674 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 TMEM183AQ8IXX5 376 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 OR52N5Q8NH56 324 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 TMEM242Q9NWH2 141 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 WDR83OSQ9Y284 106 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 LSM5Q9Y4Y9 91 aaKnown RBP7.91□□□□□ -1.14
SNHG3-201ENST00000413987 TGIF2-C20orf24A0A0A6YYL0 155 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 A8MVM7 634 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 J3QLI3 93 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 SRSF10O75494 262 aaKnown RBP7.91□□□□□ -1.14
SNHG3-201ENST00000413987 HSPB1P04792 205 aaKnown RBP7.91□□□□□ -1.14
SNHG3-201ENST00000413987 SERPINA7P05543 415 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 WNT2P09544 360 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 HIST1H1DP16402 221 aaKnown RBP7.91□□□□□ -1.14
SNHG3-201ENST00000413987 SERPINA2P20848 420 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 ERVFRD-1P60508 538 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 RTL6Q6ICC9 239 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 ZNF664Q8N3J9 261 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 FAM213BQ8TBF2 198 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 RNF183Q96D59 192 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 SIGLEC12Q96PQ1 595 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 PROK2Q9HC23 129 aa7.91□□□□□ -1.14
SNHG3-201ENST00000413987 MAP1BP46821 2468 aaKnown RBP7.9□□□□□ -1.14
SNHG3-201ENST00000413987 K7N7A8 449 aa7.9□□□□□ -1.14
SNHG3-201ENST00000413987 M0R143 59 aa7.9□□□□□ -1.14
SNHG3-201ENST00000413987 IGF1P05019 195 aa7.9□□□□□ -1.14
SNHG3-201ENST00000413987 SRP19P09132 144 aaKnown RBP7.9□□□□□ -1.14
SNHG3-201ENST00000413987 METTL15P1P0C7V9 234 aa7.9□□□□□ -1.14
SNHG3-201ENST00000413987 OR5H8P0DN80 308 aa7.9□□□□□ -1.14
SNHG3-201ENST00000413987 GZMBP10144 247 aa7.9□□□□□ -1.14
SNHG3-201ENST00000413987 GDF1P27539 372 aa7.9□□□□□ -1.14
SNHG3-201ENST00000413987 AADACL3Q5VUY0 350 aa7.9□□□□□ -1.14
SNHG3-201ENST00000413987 ZNF343Q6P1L6 599 aa7.9□□□□□ -1.14
SNHG3-201ENST00000413987 MRPL52Q86TS9 123 aaKnown RBP7.9□□□□□ -1.14
SNHG3-201ENST00000413987 OR5D14Q8NGL3 314 aa7.9□□□□□ -1.14
SNHG3-201ENST00000413987 OR13G1Q8NGZ3 307 aa7.9□□□□□ -1.14
SNHG3-201ENST00000413987 FRZBQ92765 325 aa7.9□□□□□ -1.14
SNHG3-201ENST00000413987 ATP5SQ99766 215 aa7.9□□□□□ -1.14
SNHG3-201ENST00000413987 GGCTO75223 188 aaKnown RBP7.9□□□□□ -1.15
SNHG3-201ENST00000413987 C8orf88P0DMB2 117 aa7.9□□□□□ -1.15
SNHG3-201ENST00000413987 PI3P19957 117 aa7.9□□□□□ -1.15
SNHG3-201ENST00000413987 PPP1CCP36873 323 aaKnown RBP7.9□□□□□ -1.15
SNHG3-201ENST00000413987 NKX2-1P43699 371 aaPredicted RBP7.9□□□□□ -1.15
SNHG3-201ENST00000413987 PNRC1Q12796 327 aaPredicted RBP7.9□□□□□ -1.15
SNHG3-201ENST00000413987 ACTL10Q5JWF8 245 aa7.9□□□□□ -1.15
SNHG3-201ENST00000413987 C1orf140Q5VVS0 124 aa7.9□□□□□ -1.15
SNHG3-201ENST00000413987 ZNF774Q6NX45 483 aa7.9□□□□□ -1.15
SNHG3-201ENST00000413987 PLPPR1Q8TBJ4 325 aa7.9□□□□□ -1.15
SNHG3-201ENST00000413987 GPR119Q8TDV5 335 aa7.9□□□□□ -1.15
SNHG3-201ENST00000413987 RARRES2Q99969 163 aa7.9□□□□□ -1.15
SNHG3-201ENST00000413987 LPAR5Q9H1C0 372 aa7.9□□□□□ -1.15
SNHG3-201ENST00000413987 DEPPQ9NTK1 212 aa7.9□□□□□ -1.15
SNHG3-201ENST00000413987 B4GALT7Q9UBV7 327 aa7.9□□□□□ -1.15
SNHG3-201ENST00000413987 NCKAP5O14513 1909 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 FREM3P0C091 2139 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 A0A1W2PQD3 144 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 PINLYPA6NC86 204 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 SLC16A7O60669 478 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 SNRPCP09234 159 aaKnown RBP7.89□□□□□ -1.15
SNHG3-201ENST00000413987 ANOS1P23352 680 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 DUSP1P28562 367 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 APOBEC1P41238 236 aaKnown RBP7.89□□□□□ -1.15
SNHG3-201ENST00000413987 RAB7AP51149 207 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 RND2P52198 227 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 RPL27P61353 136 aaKnown RBP7.89□□□□□ -1.15
SNHG3-201ENST00000413987 FOXF1Q12946 379 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 ARFRP1Q13795 201 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 ATP6V1FQ16864 119 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 DEFB109BQ30KR1 87 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 ACSF3Q4G176 576 aaPredicted RBP7.89□□□□□ -1.15
SNHG3-201ENST00000413987 ZNF506Q5JVG8 444 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 C20orf204Q6ZNR8 217 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 ALPK2Q86TB3 2170 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 THAP8Q8NA92 274 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 OR52N4Q8NGI2 321 aa7.89□□□□□ -1.15
SNHG3-201ENST00000413987 OR10G4Q8NGN3 311 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms