RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 C11orf88Q6PI97 169 aa24.32■■□□□ 1.48
CSNK1E-206ENST00000413574 OR4C13Q8NGP0 309 aa24.32■■□□□ 1.48
CSNK1E-206ENST00000413574 DEDD2Q8WXF8 326 aa24.32■■□□□ 1.48
CSNK1E-206ENST00000413574 RAMP3O60896 148 aa24.32■■□□□ 1.48
CSNK1E-206ENST00000413574 HKR1P10072 659 aa24.32■■□□□ 1.48
CSNK1E-206ENST00000413574 RRASP10301 218 aa24.32■■□□□ 1.48
CSNK1E-206ENST00000413574 PLA2G10O15496 165 aa24.31■■□□□ 1.48
CSNK1E-206ENST00000413574 CATR1Q13166 79 aa24.31■■□□□ 1.48
CSNK1E-206ENST00000413574 TMEM177Q53S58 311 aa24.31■■□□□ 1.48
CSNK1E-206ENST00000413574 TBC1D26Q86UD7 250 aa24.31■■□□□ 1.48
CSNK1E-206ENST00000413574 SPAG16Q8N0X2 631 aa24.31■■□□□ 1.48
CSNK1E-206ENST00000413574 FAM71E2Q8N5Q1 922 aa24.31■■□□□ 1.48
CSNK1E-206ENST00000413574 ZFAND1Q8TCF1 268 aa24.31■■□□□ 1.48
CSNK1E-206ENST00000413574 TMEM158Q8WZ71 300 aa24.31■■□□□ 1.48
CSNK1E-206ENST00000413574 RTBDNQ9BSG5 229 aaPredicted RBP24.31■■□□□ 1.48
CSNK1E-206ENST00000413574 ZNF702PQ9H963 129 aa24.31■■□□□ 1.48
CSNK1E-206ENST00000413574 SIGLEC9Q9Y336 463 aa24.31■■□□□ 1.48
CSNK1E-206ENST00000413574 SRRM4A7MD48 611 aaKnown RBP24.3■■□□□ 1.48
CSNK1E-206ENST00000413574 RNF212BA8MTL3 300 aa24.3■■□□□ 1.48
CSNK1E-206ENST00000413574 NBR2O15453 112 aa24.3■■□□□ 1.48
CSNK1E-206ENST00000413574 FGF16O43320 207 aa24.3■■□□□ 1.48
CSNK1E-206ENST00000413574 CCR6P51684 374 aa24.3■■□□□ 1.48
CSNK1E-206ENST00000413574 RAG2P55895 527 aa24.3■■□□□ 1.48
CSNK1E-206ENST00000413574 PIGPP57054 158 aa24.3■■□□□ 1.48
CSNK1E-206ENST00000413574 CBX3Q13185 183 aa24.3■■□□□ 1.48
CSNK1E-206ENST00000413574 OR8H1Q8NGG4 311 aa24.3■■□□□ 1.48
CSNK1E-206ENST00000413574 HARBI1Q96MB7 349 aa24.3■■□□□ 1.48
CSNK1E-206ENST00000413574 C5orf66Q9H5L9 145 aa24.3■■□□□ 1.48
CSNK1E-206ENST00000413574 GPR132Q9UNW8 380 aa24.3■■□□□ 1.48
CSNK1E-206ENST00000413574 VSIG4Q9Y279 399 aa24.3■■□□□ 1.48
CSNK1E-206ENST00000413574 M0QZK8 103 aa24.29■■□□□ 1.48
CSNK1E-206ENST00000413574 SHOXO15266 292 aa24.29■■□□□ 1.48
CSNK1E-206ENST00000413574 CTSDP07339 412 aaPredicted RBP24.29■■□□□ 1.48
CSNK1E-206ENST00000413574 ECI1P42126 302 aa24.29■■□□□ 1.48
CSNK1E-206ENST00000413574 NPBQ8NG41 125 aa24.29■■□□□ 1.48
CSNK1E-206ENST00000413574 ZNF486Q96H40 463 aaPredicted RBP24.29■■□□□ 1.48
CSNK1E-206ENST00000413574 TSPAN9O75954 239 aa24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 PSG5Q15238 335 aa24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 C9orf152Q5JTZ5 239 aa24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 RNF5Q99942 180 aa24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 FBXL15Q9H469 300 aa24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 COL6A5A8TX70 2615 aa24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 NDUFA3O95167 84 aa24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 NDUFA7O95182 113 aa24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 IGLV2-23P01705 113 aa24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 S100GP29377 79 aa24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 IFITM3Q01628 133 aa24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 SURF2Q15527 256 aaPredicted RBP24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 OR4S2Q8NH73 311 aa24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 MDFIQ99750 246 aa24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 PRSS22Q9GZN4 317 aa24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 RANBP3Q9H6Z4 567 aaPredicted RBP24.28■■□□□ 1.48
CSNK1E-206ENST00000413574 MPPED1O15442 326 aa24.27■■□□□ 1.48
CSNK1E-206ENST00000413574 UPK1BO75841 260 aa24.27■■□□□ 1.48
CSNK1E-206ENST00000413574 VSIG10L2P0DP72 767 aa24.27■■□□□ 1.48
CSNK1E-206ENST00000413574 MDKP21741 143 aaPredicted RBP24.27■■□□□ 1.48
CSNK1E-206ENST00000413574 F2RP25116 425 aa24.27■■□□□ 1.48
CSNK1E-206ENST00000413574 BTCP35070 178 aa24.27■■□□□ 1.48
CSNK1E-206ENST00000413574 RND3P61587 244 aa24.27■■□□□ 1.48
CSNK1E-206ENST00000413574 TSNAXQ99598 290 aaKnown RBP24.27■■□□□ 1.48
CSNK1E-206ENST00000413574 RASL11BQ9BPW5 248 aa24.27■■□□□ 1.48
CSNK1E-206ENST00000413574 KIAA1456Q9P272 454 aa24.27■■□□□ 1.48
CSNK1E-206ENST00000413574 C14orf166Q9Y224 244 aaKnown RBP24.27■■□□□ 1.48
CSNK1E-206ENST00000413574 PLXNB1O43157 2135 aa24.26■■□□□ 1.47
CSNK1E-206ENST00000413574 NAP1L6A6NFF2 107 aa24.26■■□□□ 1.47
CSNK1E-206ENST00000413574 RRHO14718 337 aa24.26■■□□□ 1.47
CSNK1E-206ENST00000413574 SLC25A17O43808 307 aa24.26■■□□□ 1.47
CSNK1E-206ENST00000413574 KIR2DS2P43631 304 aa24.26■■□□□ 1.47
CSNK1E-206ENST00000413574 C5orf64Q2M2E5 130 aa24.26■■□□□ 1.47
CSNK1E-206ENST00000413574 TMEM95Q3KNT9 176 aa24.26■■□□□ 1.47
CSNK1E-206ENST00000413574 TPSG1Q9NRR2 321 aa24.26■■□□□ 1.47
CSNK1E-206ENST00000413574 COPZ2Q9P299 210 aa24.26■■□□□ 1.47
CSNK1E-206ENST00000413574 METTL1Q9UBP6 276 aaKnown RBP24.26■■□□□ 1.47
CSNK1E-206ENST00000413574 CENPXA8MT69 81 aa24.25■■□□□ 1.47
CSNK1E-206ENST00000413574 VKORC1L1Q8N0U8 176 aa24.25■■□□□ 1.47
CSNK1E-206ENST00000413574 POC5Q8NA72 575 aa24.25■■□□□ 1.47
CSNK1E-206ENST00000413574 ADAD2Q8NCV1 583 aaKnown RBP24.25■■□□□ 1.47
CSNK1E-206ENST00000413574 LINC01006Q8NI28 216 aa24.25■■□□□ 1.47
CSNK1E-206ENST00000413574 OSR1Q8TAX0 266 aaPredicted RBP24.25■■□□□ 1.47
CSNK1E-206ENST00000413574 C7orf50Q9BRJ6 194 aaKnown RBP24.25■■□□□ 1.47
CSNK1E-206ENST00000413574 LIN7CQ9NUP9 197 aaKnown RBP24.25■■□□□ 1.47
CSNK1E-206ENST00000413574 TMEM89A2RUT3 159 aa24.24■■□□□ 1.47
CSNK1E-206ENST00000413574 LYRM1O43325 122 aa24.24■■□□□ 1.47
CSNK1E-206ENST00000413574 LGALS7P47929 136 aa24.24■■□□□ 1.47
CSNK1E-206ENST00000413574 OR4F5Q8NH21 305 aa24.24■■□□□ 1.47
CSNK1E-206ENST00000413574 TBC1D24Q9ULP9 559 aa24.24■■□□□ 1.47
CSNK1E-206ENST00000413574 TENM1Q9UKZ4 2725 aa24.24■■□□□ 1.47
CSNK1E-206ENST00000413574 PLGLAQ15195 96 aa24.24■■□□□ 1.47
CSNK1E-206ENST00000413574 ZNF585BQ52M93 769 aa24.24■■□□□ 1.47
CSNK1E-206ENST00000413574 CLCC1Q96S66 551 aa24.24■■□□□ 1.47
CSNK1E-206ENST00000413574 HSPB9Q9BQS6 159 aa24.24■■□□□ 1.47
CSNK1E-206ENST00000413574 C16orf95Q9H693 158 aa24.24■■□□□ 1.47
CSNK1E-206ENST00000413574 LINC01548A6NM66 108 aa24.23■■□□□ 1.47
CSNK1E-206ENST00000413574 FCN1O00602 326 aa24.23■■□□□ 1.47
CSNK1E-206ENST00000413574 RBFOX2O43251 390 aaKnown RBP eCLIP24.23■■□□□ 1.47
CSNK1E-206ENST00000413574 S1PR2O95136 353 aa24.23■■□□□ 1.47
CSNK1E-206ENST00000413574 Q8N2B8 174 aa24.23■■□□□ 1.47
CSNK1E-206ENST00000413574 CCDC71LQ8N9Z2 235 aa24.23■■□□□ 1.47
CSNK1E-206ENST00000413574 ARSJQ5FYB0 599 aaPredicted RBP24.22■■□□□ 1.47
CSNK1E-206ENST00000413574 OR2T6Q8NHC8 308 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms