RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 OR2T27Q8NH04 317 aa2.34□□□□□ -2.03
HMGB3P31-201ENST00000413333 ASB17Q8WXJ9 295 aa2.34□□□□□ -2.03
HMGB3P31-201ENST00000413333 DIRAS2Q96HU8 199 aa2.34□□□□□ -2.03
HMGB3P31-201ENST00000413333 C9orf16Q9BUW7 83 aa2.34□□□□□ -2.03
HMGB3P31-201ENST00000413333 OR51I2Q9H344 312 aa2.34□□□□□ -2.03
HMGB3P31-201ENST00000413333 CXorf21Q9HAI6 301 aa2.34□□□□□ -2.03
HMGB3P31-201ENST00000413333 OR6C6A6NF89 314 aa2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 OR11H12B2RN74 326 aa2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 M0R036 132 aa2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 UBFD1O14562 309 aaKnown RBP2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 ZNF73O43830 326 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 CCL3P10147 92 aa2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 MAP2K4P45985 399 aa2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 BASP1P80723 227 aaKnown RBP2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 BATFQ16520 125 aa2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 IMPG1Q17R60 797 aa2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 C1orf194Q5T5A4 169 aa2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 OR11H2Q8NH07 326 aa2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 C16orf78Q8WTQ4 265 aa2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 OPTNQ96CV9 577 aa2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 TMA16Q96EY4 203 aaKnown RBP2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 CCDC42Q96M95 316 aa2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 NMNAT3Q96T66 252 aa2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 TXNL4BQ9NX01 149 aaKnown RBP2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 LSM5Q9Y4Y9 91 aaKnown RBP2.33□□□□□ -2.04
HMGB3P31-201ENST00000413333 ATG2BQ96BY7 2078 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 TGIF2-C20orf24A0A0A6YYL0 155 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 A0A0J9YX75 114 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 GRIFINA4D1Z8 144 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 APOMO95445 188 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 RPS17P08708 135 aaKnown RBP2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 UCHL3P15374 230 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 LGALS3P17931 250 aaKnown RBP2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 GZMHP20718 246 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 PPP1R2P41236 205 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 CDKN2CP42773 168 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 GZMMP51124 257 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 CEBPGP53567 150 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 HOXC5Q00444 222 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 TNFRSF9Q07011 255 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 LRRC75BQ2VPJ9 315 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 PLPPR5Q32ZL2 321 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 PPP1R2P3Q6NXS1 205 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 SMARCD3Q6STE5 483 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 C5orf46Q6UWT4 87 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 RAB2BQ8WUD1 216 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 FGF13Q92913 245 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 SFRP2Q96HF1 295 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 C20orf166-AS1Q96NR2 134 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 STACQ99469 402 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 TUBA4BQ9H853 241 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 ATPIF1Q9UII2 106 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 ANAPC10Q9UM13 185 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 PRELID1Q9Y255 219 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 MMACHCQ9Y4U1 282 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 PXMP4Q9Y6I8 212 aa2.32□□□□□ -2.04
HMGB3P31-201ENST00000413333 C17orf51A8MQB3 221 aa2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 GOLGA6L19H0YKK7 550 aa2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 C3orf84H3BNL1 204 aa2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 KCNK1O00180 336 aa2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 CTXN2P0C2S0 81 aa2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 HIST1H1EP10412 219 aaKnown RBP2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 CBR1P16152 277 aa2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 CCL1P22362 96 aa2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 TBPL1P62380 186 aa2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 DR1Q01658 176 aa2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 GNA12Q03113 381 aa2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 EMX1Q04741 257 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 TMEM176BQ3YBM2 270 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 HIST2H3PS2Q5TEC6 136 aa2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 C2orf91Q6ZV80 131 aa2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 SPATA12Q7Z6I5 190 aa2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 RNASE6Q93091 150 aaKnown RBP2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 GNPNAT1Q96EK6 184 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 CCL13Q99616 98 aa2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 LTBP2Q14767 1821 aa2.31□□□□□ -2.04
HMGB3P31-201ENST00000413333 DICER1Q9UPY3 1922 aaKnown RBP2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 MDFIC2A0A1B0GVS7 189 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 OR5K4A6NMS3 321 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 DISC1C4P0D8 188 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 COX7A2LO14548 114 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 ZNF189O75820 626 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 RPP14O95059 124 aaKnown RBP2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 NSA2O95478 260 aaKnown RBP2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 IGHV1-69P01742 117 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 FOXF1Q12946 379 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 STX5Q13190 355 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 SFXN4Q6P4A7 337 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 ZNF550Q7Z398 422 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 UMODL1-AS1Q8N2C9 162 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 CNEP1R1Q8N9A8 125 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 OR4C16Q8NGL9 310 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 MIEN1Q9BRT3 115 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 FAM96AQ9H5X1 160 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 COQ4Q9Y3A0 265 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 SNAPC4Q5SXM2 1469 aa2.3□□□□□ -2.04
HMGB3P31-201ENST00000413333 H3BPC8 53 aa2.29□□□□□ -2.04
HMGB3P31-201ENST00000413333 IFNA16P05015 189 aa2.29□□□□□ -2.04
HMGB3P31-201ENST00000413333 GZMBP10144 247 aa2.29□□□□□ -2.04
HMGB3P31-201ENST00000413333 GABRA2P47869 451 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms