RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PRSS29PA6NIE9 313 aa4.4□□□□□ -1.7
HERC4-205ENST00000412272 MT-CO3P00414 261 aa4.4□□□□□ -1.7
HERC4-205ENST00000412272 TNFP01375 233 aa4.4□□□□□ -1.7
HERC4-205ENST00000412272 EGR1P18146 543 aa4.4□□□□□ -1.7
HERC4-205ENST00000412272 TMEM97Q5BJF2 176 aa4.4□□□□□ -1.7
HERC4-205ENST00000412272 C2orf91Q6ZV80 131 aa4.4□□□□□ -1.7
HERC4-205ENST00000412272 SH2D6Q7Z4S9 175 aa4.4□□□□□ -1.7
HERC4-205ENST00000412272 DUX3Q96PT4 197 aa4.4□□□□□ -1.7
HERC4-205ENST00000412272 MCHR1Q99705 422 aa4.4□□□□□ -1.7
HERC4-205ENST00000412272 POLR1DQ9Y2S0 133 aa4.4□□□□□ -1.7
HERC4-205ENST00000412272 MDC1Q14676 2089 aaKnown RBP4.4□□□□□ -1.7
HERC4-205ENST00000412272 LIPT2A6NK58 231 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 F8W1H4 67 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 FCN1O00602 326 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 ZNF737O75373 536 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 FCN3O75636 299 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 OR7C1O76099 320 aaPredicted RBP4.4□□□□□ -1.71
HERC4-205ENST00000412272 PVRP15151 417 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 EVI2AP22794 236 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 FAM159AQ6UWV7 190 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 ACP7Q6ZNF0 438 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 SLC22A18ASQ8N1D0 253 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 LRRC25Q8N386 305 aaPredicted RBP4.4□□□□□ -1.71
HERC4-205ENST00000412272 OR51T1Q8NGJ9 327 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 MBD3L1Q8WWY6 194 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 NAT6Q93015 286 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 GNPNAT1Q96EK6 184 aaPredicted RBP4.4□□□□□ -1.71
HERC4-205ENST00000412272 GMPPAQ96IJ6 420 aaPredicted RBP4.4□□□□□ -1.71
HERC4-205ENST00000412272 KCNS1Q96KK3 526 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 AP1S3Q96PC3 154 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 OR2D2Q9H210 308 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 LRRC3CA6NJW4 275 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 PRR32B1ATL7 298 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 ISLRO14498 428 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 TIMM8AO60220 97 aaPredicted RBP4.4□□□□□ -1.71
HERC4-205ENST00000412272 LDB3O75112 727 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 C8orf88P0DMB2 117 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 CXorf66Q5JRM2 361 aaPredicted RBP4.4□□□□□ -1.71
HERC4-205ENST00000412272 MEIG1Q5JSS6 88 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 OR4C11Q6IEV9 310 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 SLC25A34Q6PIV7 304 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 HMGN2P46Q86SG4 172 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 MEX3DQ86XN8 651 aaKnown RBP4.4□□□□□ -1.71
HERC4-205ENST00000412272 OR1L8Q8NGR8 309 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 PPTC7Q8NI37 304 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 OR4C12Q96R67 309 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 PRR13Q9NZ81 148 aa4.4□□□□□ -1.71
HERC4-205ENST00000412272 A0A1W2PQF6 199 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 PTGESO14684 152 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 BNIP3LO60238 219 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 KLK1P06870 262 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 HIST1H1DP16402 221 aaKnown RBP4.39□□□□□ -1.71
HERC4-205ENST00000412272 SGSHP51688 502 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 TIRAPP58753 221 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 LY6DQ14210 128 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 RPEL1Q2QD12 228 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 KCNIP4Q6PIL6 250 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 TMEM123Q8N131 208 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 RASL10AQ92737 203 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 SLC35A4Q96G79 324 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 SCRT2Q9NQ03 307 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 CD207Q9UJ71 328 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 A0A1W2PQH9 124 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 METTL12A8MUP2 240 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 C9JAW5 83 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 TMEM250H0YL14 139 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 NPPBP16860 134 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 DRD3P35462 400 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 C3AR1Q16581 482 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 FNDC7Q5VTL7 733 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 CBLN3Q6UW01 205 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 TRAPPC6BQ86SZ2 158 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 BAGE3Q86Y29 109 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 BAGE2Q86Y30 109 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 TEX29Q8N6K0 151 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 ZFP62Q8NB50 900 aaPredicted RBP4.39□□□□□ -1.71
HERC4-205ENST00000412272 MDS2Q8NDY4 140 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 ZNF721Q8TF20 911 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 Q96M85 177 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 SCNM1Q9BWG6 230 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 GLIPR2Q9H4G4 154 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 SIGLEC8Q9NYZ4 499 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 HIGD1AQ9Y241 93 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 KIAA1549Q9HCM3 1950 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 SCN2AQ99250 2005 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 TRBV20-1A0A075B6N2 111 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 PLPP1O14494 284 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 ZNF324O75467 553 aaPredicted RBP4.39□□□□□ -1.71
HERC4-205ENST00000412272 OR2J3O76001 311 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 BCL2P10415 239 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 HTR1DP28221 377 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 GPR183P32249 361 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 MFGE8Q08431 387 aaPredicted RBP4.39□□□□□ -1.71
HERC4-205ENST00000412272 EIF3IQ13347 325 aaKnown RBP4.39□□□□□ -1.71
HERC4-205ENST00000412272 LY6KQ17RY6 165 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 ETDBQ3ZM63 59 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.39□□□□□ -1.716e-6■■■□□ 19.1
HERC4-205ENST00000412272 ZNF550Q7Z398 422 aa4.39□□□□□ -1.71
HERC4-205ENST00000412272 RBMXL3Q8N7X1 1067 aaKnown RBP4.39□□□□□ -1.71
HERC4-205ENST00000412272 OR13A1Q8NGR1 328 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms