RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 SPINT2O43291 252 aa13.21□□□□□ -0.3
HOXD3-202ENST00000410016 MBP02144 154 aa13.21□□□□□ -0.3
HOXD3-202ENST00000410016 AARDQ4LEZ3 155 aa13.21□□□□□ -0.3
HOXD3-202ENST00000410016 GGACTQ9BVM4 153 aa13.21□□□□□ -0.3
HOXD3-202ENST00000410016 MIOXQ9UGB7 285 aa13.21□□□□□ -0.3
HOXD3-202ENST00000410016 TRBV24-1A0A075B6N3 115 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 AHRRA9YTQ3 701 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 DUTP33316 252 aaKnown RBP13.2□□□□□ -0.3
HOXD3-202ENST00000410016 CR1LQ2VPA4 569 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 CYP2G1PQ6ZSU1 146 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 SEM1Q6ZVN7 128 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 FAM90A1Q86YD7 464 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 CTDSP1Q9GZU7 261 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 INTS1Q8N201 2190 aaKnown RBP13.2□□□□□ -0.3
HOXD3-202ENST00000410016 C15orf62A8K5M9 175 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 SRRM5B3KS81 715 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 RBMXL2O75526 392 aaKnown RBP13.2□□□□□ -0.3
HOXD3-202ENST00000410016 OR9G9P0C7N8 305 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 EDDM3AQ14507 147 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 P2RY6Q15077 328 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 FFAR4Q5NUL3 377 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 TRAT1Q6PIZ9 186 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 C1orf87Q8N0U7 546 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 FAM169BQ8N8A8 192 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 OR2Z1Q8NG97 314 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 GATAD1Q8WUU5 269 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 RAB24Q969Q5 203 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 SMIM7Q9BQ49 75 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 QTRT1Q9BXR0 403 aaKnown RBP13.2□□□□□ -0.3
HOXD3-202ENST00000410016 NAT8Q9UHE5 227 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 SLC25A15Q9Y619 301 aa13.2□□□□□ -0.3
HOXD3-202ENST00000410016 BOD1L1Q8NFC6 3051 aa13.19□□□□□ -0.3
HOXD3-202ENST00000410016 PTPRBP23467 1997 aa13.19□□□□□ -0.3
HOXD3-202ENST00000410016 TMEM250H0YL14 139 aa13.19□□□□□ -0.3
HOXD3-202ENST00000410016 KBTBD11O94819 623 aa13.19□□□□□ -0.3
HOXD3-202ENST00000410016 GZMHP20718 246 aa13.19□□□□□ -0.3
HOXD3-202ENST00000410016 TLE1Q04724 770 aa13.19□□□□□ -0.3
HOXD3-202ENST00000410016 MORN2Q502X0 79 aa13.19□□□□□ -0.3
HOXD3-202ENST00000410016 LRP11Q86VZ4 500 aa13.19□□□□□ -0.3
HOXD3-202ENST00000410016 C1orf174Q8IYL3 243 aa13.19□□□□□ -0.3
HOXD3-202ENST00000410016 FRZBQ92765 325 aa13.19□□□□□ -0.3
HOXD3-202ENST00000410016 R3HDM4Q96D70 268 aa13.19□□□□□ -0.3
HOXD3-202ENST00000410016 OPN1MWP04001 364 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 FTH1P19P0C7X4 201 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 OPN1MW2P0DN77 364 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 OPN1MW3P0DN78 364 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 CFHR2P36980 270 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 PSMB3P49720 205 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 LTC4SQ16873 150 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 TMEM241Q24JQ0 296 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 BHLHA15Q7RTS1 189 aaPredicted RBP13.18□□□□□ -0.3
HOXD3-202ENST00000410016 DEFB124Q8NES8 71 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 EDARADDQ8WWZ3 215 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 ACTR3CQ9C0K3 210 aaPredicted RBP13.18□□□□□ -0.3
HOXD3-202ENST00000410016 SPAARA0A1B0GVQ0 90 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 TRGC1P0CF51 173 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 SPRNQ5BIV9 151 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 PYY3Q5JQD4 70 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 PLPPR2Q96GM1 343 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 PROCRQ9UNN8 238 aa13.18□□□□□ -0.3
HOXD3-202ENST00000410016 NDUFS6O75380 124 aaKnown RBP13.17□□□□□ -0.3
HOXD3-202ENST00000410016 IGHV2-70P01814 119 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 DEFA4P12838 97 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 S100PP25815 95 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 ZNF134P52741 427 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 LOXL3P58215 753 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 GFI1BQ5VTD9 330 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 GCSAMQ8N6F7 178 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 Q8TCH9 128 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 GAR1Q9NY12 217 aaKnown RBP13.17□□□□□ -0.3
HOXD3-202ENST00000410016 OR6C3Q9NZP0 311 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 WASF3Q9UPY6 502 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 YPEL1O60688 119 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 FCGR3BO75015 233 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 PFN1P07737 140 aaKnown RBP13.17□□□□□ -0.3
HOXD3-202ENST00000410016 SOD3P08294 240 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 GPR12P47775 334 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 RPL23P62829 140 aaKnown RBP13.17□□□□□ -0.3
HOXD3-202ENST00000410016 MZT1Q08AG7 82 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 RPUSD4Q96CM3 377 aaKnown RBP13.17□□□□□ -0.3
HOXD3-202ENST00000410016 YPEL2Q96QA6 119 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 DIRC2Q96SL1 478 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 PARLQ9H300 379 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 JPT1Q9UK76 154 aa13.17□□□□□ -0.3
HOXD3-202ENST00000410016 HEATR1Q9H583 2144 aaKnown RBP13.16□□□□□ -0.3
HOXD3-202ENST00000410016 SEC14L6B5MCN3 397 aa13.16□□□□□ -0.3
HOXD3-202ENST00000410016 HPRT1P00492 218 aa13.16□□□□□ -0.3
HOXD3-202ENST00000410016 ADIRFQ15847 76 aa13.16□□□□□ -0.3
HOXD3-202ENST00000410016 ZNF709Q8N972 641 aa13.16□□□□□ -0.3
HOXD3-202ENST00000410016 SNX22Q96L94 193 aa13.16□□□□□ -0.3
HOXD3-202ENST00000410016 PYGO2Q9BRQ0 406 aa13.16□□□□□ -0.3
HOXD3-202ENST00000410016 MANBALQ9NQG1 85 aa13.16□□□□□ -0.3
HOXD3-202ENST00000410016 GNG12Q9UBI6 72 aa13.16□□□□□ -0.3
HOXD3-202ENST00000410016 DUSP13Q9UII6 198 aa13.16□□□□□ -0.3
HOXD3-202ENST00000410016 WDR83OSQ9Y284 106 aa13.16□□□□□ -0.3
HOXD3-202ENST00000410016 EP300Q09472 2414 aaPredicted RBP13.16□□□□□ -0.3
HOXD3-202ENST00000410016 LAMA5O15230 3695 aa13.16□□□□□ -0.3
HOXD3-202ENST00000410016 MBD3L4A6NDZ8 208 aaPredicted RBP13.16□□□□□ -0.3
HOXD3-202ENST00000410016 MBD3L3A6NE82 208 aaPredicted RBP13.16□□□□□ -0.3
HOXD3-202ENST00000410016 MBD3L5A6NJ08 208 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms