RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 PXDC1Q5TGL8 231 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 LINC00596Q86U02 117 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 MARVELD3Q96A59 401 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 GPR146Q96CH1 333 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 RAMP3O60896 148 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 FOXH1O75593 365 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 DFFBO76075 338 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 TDGF1P3P51864 188 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 LYZP61626 148 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 IL17RELQ6ZVW7 336 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 KIR3DL3Q8N743 410 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 TMEM204Q9BSN7 226 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 NMES1Q9C002 83 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 AUP1Q9Y679 476 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 C17orf112F2Z3M2 114 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 IFNA1P01562 189 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 MGST1P10620 155 aaKnown RBP9.49□□□□□ -0.89
SNX13-202ENST00000409604 TFPI2P48307 235 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 SLC35E4Q6ICL7 350 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 RPUSD4Q96CM3 377 aaKnown RBP9.49□□□□□ -0.89
SNX13-202ENST00000409604 TMEM140Q9NV12 185 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 UQCC1Q9NVA1 299 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 HIF1ANQ9NWT6 349 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 OR51B2Q9Y5P1 312 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 C19orf84I3L1E1 186 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 HSPB1P04792 205 aaKnown RBP9.49□□□□□ -0.89
SNX13-202ENST00000409604 SLC25A4P12235 298 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 ATF4P18848 351 aaPredicted RBP9.49□□□□□ -0.89
SNX13-202ENST00000409604 S100A1P23297 94 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 CDSNQ15517 529 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 TMEM65Q6PI78 240 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 TM2D1Q9BX74 207 aa9.49□□□□□ -0.89
SNX13-202ENST00000409604 H3BTX0 84 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 CD37P11049 281 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 THBS3P49746 956 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 EFNA4P52798 201 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 MBNL2Q5VZF2 373 aaKnown RBP9.48□□□□□ -0.89
SNX13-202ENST00000409604 ZNF767PQ75MW2 155 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 ZNF680Q8NEM1 530 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 ST8SIA2Q92186 375 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 SPSB4Q96A44 273 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 SAT2Q96F10 170 aaPredicted RBP9.48□□□□□ -0.89
SNX13-202ENST00000409604 ZNF835Q9Y2P0 537 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 URGCP-MRPS24S4R325 110 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 A6NNC1 897 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 KIAA1324LA8MWY0 1029 aaPredicted RBP9.48□□□□□ -0.89
SNX13-202ENST00000409604 CGAP01215 116 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 UBA52P62987 128 aaKnown RBP9.48□□□□□ -0.89
SNX13-202ENST00000409604 MSMPQ1L6U9 139 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 BIVMQ86UB2 503 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 RXFP4Q8TDU9 374 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 RPS10P5Q9NQ39 176 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 CLEC5AQ9NY25 188 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 HELZ2Q9BYK8 2649 aaKnown RBP9.48□□□□□ -0.89
SNX13-202ENST00000409604 A0A1W2PRX2 142 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 ZNF729A6NN14 1252 aaPredicted RBP9.48□□□□□ -0.89
SNX13-202ENST00000409604 LEUTXA8MZ59 168 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 SLC31A2O15432 143 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 S100A6P06703 90 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 ZNF250P15622 560 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 AKR1C3P42330 323 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 LGALS7P47929 136 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 C10orf55Q5SWW7 151 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 FOXL2NBQ6ZUU3 175 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 ZNF645Q8N7E2 425 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 RNF141Q8WVD5 230 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 CIB3Q96Q77 187 aaPredicted RBP9.48□□□□□ -0.89
SNX13-202ENST00000409604 GHITMQ9H3K2 345 aa9.48□□□□□ -0.89
SNX13-202ENST00000409604 LRP4O75096 1905 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 GNG7O60262 68 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 TMEM200BQ69YZ2 307 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 PRR27Q6MZM9 219 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 UNQ5815/PRO19632Q6UWF5 114 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 COLCA1Q6ZS62 124 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 OR1B1Q8NGR6 318 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 AKR1E2Q96JD6 320 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 ZZEF1O43149 2961 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 COX7A2P2O60397 106 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 JTBO76095 146 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 UBE2KP61086 200 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 FFAR4Q5NUL3 377 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 WDR25Q64LD2 544 aaPredicted RBP9.47□□□□□ -0.89
SNX13-202ENST00000409604 DPF1Q92782 380 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 COQ2Q96H96 371 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 ADTRPQ96IZ2 230 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 TMEM222Q9H0R3 208 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 IFNL4K9M1U5 179 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 FGF2P09038 288 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 CT45A6P0DMU7 189 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 CT45A5P0DMU8 189 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 CT45A7P0DMV0 189 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 RPL27AP46776 148 aaKnown RBP9.47□□□□□ -0.89
SNX13-202ENST00000409604 TAS2R30P59541 319 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 CT45A1Q5HYN5 189 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 CT45A3Q8NHU0 189 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 PLEKHA2Q9HB19 425 aa9.47□□□□□ -0.89
SNX13-202ENST00000409604 NPDC1Q9NQX5 325 aaPredicted RBP9.47□□□□□ -0.89
SNX13-202ENST00000409604 COL12A1Q99715 3063 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 SAA2-SAA4A0A096LPE2 208 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 CRYM-AS1A6NIL9 109 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms