RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 TFF3Q07654 80 aa13□□□□□ -0.33
LIMS2-205ENST00000409455 ABHD17BQ5VST6 288 aa13□□□□□ -0.33
LIMS2-205ENST00000409455 ARL6IP6Q8N6S5 226 aa13□□□□□ -0.33
LIMS2-205ENST00000409455 OR5P3Q8WZ94 311 aa13□□□□□ -0.33
LIMS2-205ENST00000409455 ZFP30Q9Y2G7 519 aa13□□□□□ -0.33
LIMS2-205ENST00000409455 MED13Q9UHV7 2174 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 F6UZH7 168 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.99□□□□□ -0.33
LIMS2-205ENST00000409455 SYNGR4O95473 234 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 CRISP2P16562 243 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 KITLGP21583 273 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 CCNOP22674 350 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 MRPL21Q7Z2W9 205 aaKnown RBP12.99□□□□□ -0.33
LIMS2-205ENST00000409455 YRDCQ86U90 279 aaKnown RBP12.99□□□□□ -0.33
LIMS2-205ENST00000409455 DTD1Q8TEA8 209 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 KCNIP2Q9NS61 270 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 HSPB7Q9UBY9 170 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 ARHGAP21Q5T5U3 1957 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 KIAA1549Q9HCM3 1950 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 PINLYPA6NC86 204 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 NEURL1O76050 574 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 ESDP10768 282 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 CDKN1AP38936 164 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 UBE2G2P60604 165 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 MSMO1Q15800 293 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 RIPPLY2Q5TAB7 128 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 LINC00696Q6ZRV3 163 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 DERL1Q9BUN8 251 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 SAMD10Q9BYL1 202 aa12.99□□□□□ -0.33
LIMS2-205ENST00000409455 ZNF407Q9C0G0 2248 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 TRAV24A0A0B4J272 114 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 RNF212BA8MTL3 300 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 SYNGR1O43759 233 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 SERF1AO75920 110 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 DEFA4P12838 97 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 RAB7AP51149 207 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 CARD18P57730 90 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 CPEB3Q8NE35 698 aaKnown RBP12.98□□□□□ -0.33
LIMS2-205ENST00000409455 ASCL3Q9NQ33 180 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 TCF21O43680 179 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 BMP5P22003 454 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 SRD5A2P31213 254 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 ATP5G3P48201 142 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 COLCA1Q6ZS62 124 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 FER1L6-AS2Q96M78 137 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 CRIM1Q9NZV1 1036 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 TP53TG3Q9ULZ0 132 aa12.98□□□□□ -0.33
LIMS2-205ENST00000409455 PGPEP1LA6NFU8 196 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 ZNF716A6NP11 495 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 RBFOX2O43251 390 aaKnown RBP eCLIP12.97□□□□□ -0.33
LIMS2-205ENST00000409455 B3GALT5-AS1P59052 145 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 ANKRD39Q53RE8 183 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 BAGE3Q86Y29 109 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 BAGE2Q86Y30 109 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 C11orf42Q8N5U0 333 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 OR4B1Q8NGF8 309 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 OR5A2Q8NGI9 324 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 HES7Q9BYE0 225 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 DNAJC4Q9NNZ3 241 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 CLN8Q9UBY8 286 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 DOCK11Q5JSL3 2073 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 LOC400499M0QZD8 3231 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 PTPRZ1P23471 2315 aaPredicted RBP12.97□□□□□ -0.33
LIMS2-205ENST00000409455 TM4SF5O14894 197 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 TRAPPC6AO75865 159 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 CBLN1P23435 193 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 TFPI2P48307 235 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 LINC00310P59036 64 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 SRSF6Q13247 344 aaKnown RBP12.97□□□□□ -0.33
LIMS2-205ENST00000409455 MOB1BQ7L9L4 216 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 VASH2Q86V25 355 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 ZNF114Q8NC26 417 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 OR1L1Q8NH94 360 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 SLC35E1Q96K37 410 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 ZNF488Q96MN9 340 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 CHODLQ9H9P2 273 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 DLL3Q9NYJ7 618 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 WIPI2Q9Y4P8 454 aa12.97□□□□□ -0.33
LIMS2-205ENST00000409455 GVINP1Q7Z2Y8 2422 aa12.96□□□□□ -0.33
LIMS2-205ENST00000409455 CHRNB4P30926 498 aa12.96□□□□□ -0.33
LIMS2-205ENST00000409455 LHX2P50458 406 aa12.96□□□□□ -0.33
LIMS2-205ENST00000409455 ZNF90Q03938 601 aa12.96□□□□□ -0.33
LIMS2-205ENST00000409455 DRAM1Q8N682 238 aa12.96□□□□□ -0.33
LIMS2-205ENST00000409455 CIB3Q96Q77 187 aaPredicted RBP12.96□□□□□ -0.33
LIMS2-205ENST00000409455 MRPL18Q9H0U6 180 aaKnown RBP12.96□□□□□ -0.33
LIMS2-205ENST00000409455 OR1C1Q15619 314 aa12.96□□□□□ -0.34
LIMS2-205ENST00000409455 WIPI1Q5MNZ9 446 aaPredicted RBP12.96□□□□□ -0.34
LIMS2-205ENST00000409455 FAM58AQ8N1B3 248 aa12.96□□□□□ -0.34
LIMS2-205ENST00000409455 ABI3Q9P2A4 366 aa12.96□□□□□ -0.34
LIMS2-205ENST00000409455 TRAV9-1A0A075B6T8 112 aa12.95□□□□□ -0.34
LIMS2-205ENST00000409455 TRAV39A0A0B4J263 110 aa12.95□□□□□ -0.34
LIMS2-205ENST00000409455 PMS2P5A8MQ11 134 aa12.95□□□□□ -0.34
LIMS2-205ENST00000409455 TIMP3P35625 211 aa12.95□□□□□ -0.34
LIMS2-205ENST00000409455 OR10G8Q8NGN5 311 aa12.95□□□□□ -0.34
LIMS2-205ENST00000409455 GMPPAQ96IJ6 420 aaPredicted RBP12.95□□□□□ -0.34
LIMS2-205ENST00000409455 ZNF552Q9H707 407 aaPredicted RBP12.95□□□□□ -0.34
LIMS2-205ENST00000409455 CUL9Q8IWT3 2517 aa12.95□□□□□ -0.34
LIMS2-205ENST00000409455 A0A1W2PPV4 95 aa12.95□□□□□ -0.34
LIMS2-205ENST00000409455 LRRC30A6NM36 301 aa12.95□□□□□ -0.34
LIMS2-205ENST00000409455 CXCL13O43927 109 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms