RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 RPS27AP62979 156 aaKnown RBP5.86□□□□□ -1.47
LSM5-202ENST00000409292 HLA-DRB3P79483 266 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 RHOGP84095 191 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 PMS2P11Q13670 270 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 EXOSC2Q13868 293 aaKnown RBP5.86□□□□□ -1.47
LSM5-202ENST00000409292 TNXAQ16473 311 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 FAM106AQ4KMX7 169 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 XAF1Q6GPH4 301 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 SIGIRRQ6IA17 410 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 OR4A47Q6IF82 309 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 IL34Q6ZMJ4 242 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 LINC00322Q6ZN03 302 aaPredicted RBP5.86□□□□□ -1.47
LSM5-202ENST00000409292 C6orf201Q7Z4U5 140 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 SLC38A6Q8IZM9 456 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 DRAXINQ8NBI3 349 aaPredicted RBP5.86□□□□□ -1.47
LSM5-202ENST00000409292 NECAP1Q8NC96 275 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 ADAD2Q8NCV1 583 aaKnown RBP5.86□□□□□ -1.47
LSM5-202ENST00000409292 SETD9Q8NE22 299 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 OR52B4Q8NGK2 314 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 ACOT12Q8WYK0 555 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 PTX4Q96A99 478 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 ADTRPQ96IZ2 230 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 DERL3Q96Q80 235 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 C12orf4Q9NQ89 552 aa5.86□□□□□ -1.47
LSM5-202ENST00000409292 TRBV6-6A0A0A6YYG2 114 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 PNMA8CA0A1B0GUJ8 204 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 IZUMO1RA6ND01 250 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 EFCAB10A6NFE3 127 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 NAPSAO96009 420 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 IGKV1-16P04430 117 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 CD1AP06126 327 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 CD7P09564 240 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 CELP19835 753 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 HTR2CP28335 458 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 BMI1P35226 326 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 KIR2DS2P43631 304 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 MED22Q15528 200 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 DEFB114Q30KQ6 69 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 RBM48Q5RL73 367 aaKnown RBP5.85□□□□□ -1.47
LSM5-202ENST00000409292 ZNF57Q68EA5 555 aaPredicted RBP5.85□□□□□ -1.47
LSM5-202ENST00000409292 CEMP1Q6PRD7 247 aaPredicted RBP5.85□□□□□ -1.47
LSM5-202ENST00000409292 RBPMS2Q6ZRY4 209 aaKnown RBP5.85□□□□□ -1.47
LSM5-202ENST00000409292 MS4A15Q8N5U1 240 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 ZFP41Q8N8Y5 198 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 ZNF383Q8NA42 475 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 TEX45Q8NA69 505 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 GGHQ92820 318 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 CMSS1Q9BQ75 279 aaKnown RBP5.85□□□□□ -1.47
LSM5-202ENST00000409292 AGMATQ9BSE5 352 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 THAP7Q9BT49 309 aaPredicted RBP5.85□□□□□ -1.47
LSM5-202ENST00000409292 TM2D1Q9BX74 207 aa5.85□□□□□ -1.47
LSM5-202ENST00000409292 C6orf62Q9GZU0 229 aaPredicted RBP5.85□□□□□ -1.47
LSM5-202ENST00000409292 EPPK1P58107 5090 aaKnown RBP5.84□□□□□ -1.47
LSM5-202ENST00000409292 ZNF320A2RRD8 509 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 TRDCB7Z8K6 153 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 UBE2CO00762 179 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 CD3GP09693 182 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 FOLR2P14207 255 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 SRMP19623 302 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 MECP2P51608 486 aaKnown RBP5.84□□□□□ -1.47
LSM5-202ENST00000409292 UBE2KP61086 200 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 DYRK1AQ13627 763 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 TMEM177Q53S58 311 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 ZNF880Q6PDB4 577 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 MMD2Q8IY49 270 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 OR6M1Q8NGM8 313 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 OR4A4PQ8NGN8 299 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 OR10J5Q8NHC4 309 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 OSR1Q8TAX0 266 aaPredicted RBP5.84□□□□□ -1.47
LSM5-202ENST00000409292 SRSF12Q8WXF0 261 aaKnown RBP5.84□□□□□ -1.47
LSM5-202ENST00000409292 PHYHIPQ92561 330 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 MARC2Q969Z3 335 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 PGLYRP3Q96LB9 341 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 GINS4Q9BRT9 223 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 DCUN1D5Q9BTE7 237 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 PLGRKTQ9HBL7 147 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 AKIP1Q9NQ31 210 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 SMPD3Q9NY59 655 aaPredicted RBP5.84□□□□□ -1.47
LSM5-202ENST00000409292 RDH8Q9NYR8 311 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 OR1A1Q9P1Q5 309 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 TP53TG1Q9Y2A0 90 aa5.84□□□□□ -1.47
LSM5-202ENST00000409292 HUWE1Q7Z6Z7 4374 aaKnown RBP5.83□□□□□ -1.48
LSM5-202ENST00000409292 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.83□□□□□ -1.48
LSM5-202ENST00000409292 TRAV25A0A0B4J276 109 aa5.83□□□□□ -1.48
LSM5-202ENST00000409292 C2orf70A6NJV1 201 aa5.83□□□□□ -1.48
LSM5-202ENST00000409292 ZNF785A8K8V0 405 aa5.83□□□□□ -1.48
LSM5-202ENST00000409292 NOTOA8MTQ0 251 aa5.83□□□□□ -1.48
LSM5-202ENST00000409292 KRTAP9-7A8MTY7 169 aa5.83□□□□□ -1.48
LSM5-202ENST00000409292 LGALS9O00182 355 aa5.83□□□□□ -1.48
LSM5-202ENST00000409292 BET1O15155 118 aa5.83□□□□□ -1.48
LSM5-202ENST00000409292 CYB5BO43169 146 aa5.83□□□□□ -1.48
LSM5-202ENST00000409292 SPRY2O43597 315 aa5.83□□□□□ -1.48
LSM5-202ENST00000409292 TRBV12-3P01733 135 aa5.83□□□□□ -1.48
LSM5-202ENST00000409292 SCTP09683 121 aa5.83□□□□□ -1.48
LSM5-202ENST00000409292 APELAP0DMC3 54 aa5.83□□□□□ -1.48
LSM5-202ENST00000409292 TALDO1P37837 337 aa5.83□□□□□ -1.48
LSM5-202ENST00000409292 WNT4P56705 351 aa5.83□□□□□ -1.48
LSM5-202ENST00000409292 RPS11P62280 158 aaKnown RBP eCLIP5.83□□□□□ -1.48
LSM5-202ENST00000409292 ST3GAL4Q11206 333 aa5.83□□□□□ -1.48
LSM5-202ENST00000409292 SSX1Q16384 188 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms