RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 COX14Q96I36 57 aa10.54□□□□□ -0.72
SHANK2-203ENST00000409161 NHLRC3Q5JS37 347 aa10.54□□□□□ -0.72
SHANK2-203ENST00000409161 A0A1B0GTH9 108 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 EDIL3O43854 480 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 ZNF418Q8TF45 676 aaPredicted RBP10.53□□□□□ -0.72
SHANK2-203ENST00000409161 RPL27AP46776 148 aaKnown RBP10.53□□□□□ -0.72
SHANK2-203ENST00000409161 LOXL3P58215 753 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 CX3CL1P78423 397 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 PRSS27Q9BQR3 290 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 ST6GALNAC2Q9UJ37 374 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 GDF9O60383 454 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 C8orf88P0DMB2 117 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 MNX1P50219 401 aaPredicted RBP10.53□□□□□ -0.72
SHANK2-203ENST00000409161 FBXW9Q5XUX1 488 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 AQP3Q92482 292 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 IGHV5-51A0A0C4DH38 117 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 RBMY1BA6NDE4 496 aaKnown RBP10.53□□□□□ -0.72
SHANK2-203ENST00000409161 RBMY1EA6NEQ0 496 aaKnown RBP10.53□□□□□ -0.72
SHANK2-203ENST00000409161 TMEM50AO95807 157 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 RBMY1DP0C7P1 496 aaKnown RBP10.53□□□□□ -0.72
SHANK2-203ENST00000409161 RBMY1A1P0DJD3 496 aaKnown RBP10.53□□□□□ -0.72
SHANK2-203ENST00000409161 RBMY1CP0DJD4 496 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 SMIM8Q96KF7 97 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 CCL2P13500 99 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 TNFRSF9Q07011 255 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 RAX2Q96IS3 184 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 A0A1B0GWB2 263 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 OR2K2Q8NGT1 345 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 HDHD3Q9BSH5 251 aaPredicted RBP10.53□□□□□ -0.72
SHANK2-203ENST00000409161 PPP1R3EQ9H7J1 279 aa10.53□□□□□ -0.72
SHANK2-203ENST00000409161 FAM181BA6NEQ2 426 aa10.52□□□□□ -0.72
SHANK2-203ENST00000409161 SLC25A20O43772 301 aa10.52□□□□□ -0.72
SHANK2-203ENST00000409161 MPZL1O95297 269 aa10.52□□□□□ -0.72
SHANK2-203ENST00000409161 TDHQ8IZJ6 230 aa10.52□□□□□ -0.72
SHANK2-203ENST00000409161 SDHCQ99643 169 aaPredicted RBP10.52□□□□□ -0.72
SHANK2-203ENST00000409161 TNFRSF19Q9NS68 423 aa10.52□□□□□ -0.72
SHANK2-203ENST00000409161 PGPEP1Q9NXJ5 209 aa10.52□□□□□ -0.72
SHANK2-203ENST00000409161 CACNA1HO95180 2353 aa10.52□□□□□ -0.72
SHANK2-203ENST00000409161 PRKNO60260 465 aaPredicted RBP10.52□□□□□ -0.72
SHANK2-203ENST00000409161 LINC01559Q495D7 138 aa10.52□□□□□ -0.72
SHANK2-203ENST00000409161 ZNF658BQ4V348 819 aaPredicted RBP10.52□□□□□ -0.72
SHANK2-203ENST00000409161 RASL10BQ96S79 203 aa10.52□□□□□ -0.72
SHANK2-203ENST00000409161 TIMP4Q99727 224 aa10.52□□□□□ -0.72
SHANK2-203ENST00000409161 ZNF146Q15072 292 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 ZIC1Q15915 447 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 FAM27BQ5VT28 67 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 FAM71F2Q6NXP2 309 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 LINC01555Q8NAE3 123 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 FAM216AQ8WUB2 273 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 J3KRW8 73 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 F12P00748 615 aaPredicted RBP10.52□□□□□ -0.73
SHANK2-203ENST00000409161 NGFRP08138 427 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 MFAP4P55083 255 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 SUMO2P61956 95 aaKnown RBP10.52□□□□□ -0.73
SHANK2-203ENST00000409161 DMRTA1Q5VZB9 504 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 TRAV39A0A0B4J263 110 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 MGST3O14880 152 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 IGHV1OR21-1A0A087WYE8 117 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 TNFSF14O43557 240 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 HLA-DQB1P01920 261 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 KLK2P20151 261 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 NEU1Q99519 415 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 SOSTQ9BQB4 213 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 PRR13Q9NZ81 148 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 ZP4Q12836 540 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 C8orf82Q6P1X6 216 aaPredicted RBP10.52□□□□□ -0.73
SHANK2-203ENST00000409161 MARCH11A6NNE9 402 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 CA1P00915 261 aaPredicted RBP10.52□□□□□ -0.73
SHANK2-203ENST00000409161 IGHV3-13P01766 116 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 IGHV3-7P01780 117 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 CXCL10P02778 98 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 CTAG1AP78358 180 aa10.52□□□□□ -0.73
SHANK2-203ENST00000409161 PEX11BO96011 259 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 FMC1Q96HJ9 113 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 NPFFO15130 113 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
SHANK2-203ENST00000409161 P2RY6Q15077 328 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 TTC9CQ8N5M4 171 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 TMEM252Q8N6L7 170 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 ASIPP42127 132 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 COL10A1Q03692 680 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 KRTCAP3Q53RY4 240 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 GCSAMLQ5JQS6 135 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 SSBP4Q9BWG4 385 aaPredicted RBP10.51□□□□□ -0.73
SHANK2-203ENST00000409161 FAM90A27PA6NNH2 459 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 TSPAN2O60636 221 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 MBNL2Q5VZF2 373 aaKnown RBP10.51□□□□□ -0.73
SHANK2-203ENST00000409161 MBD1Q9UIS9 605 aaPredicted RBP10.51□□□□□ -0.73
SHANK2-203ENST00000409161 SPCS1Q9Y6A9 102 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 CD8AP01732 235 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 IFI6P09912 130 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 SFTPCP11686 197 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 DERL1Q9BUN8 251 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 ARRDC1-AS1Q9H2J1 176 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 SF3B6Q9Y3B4 125 aaKnown RBP10.51□□□□□ -0.73
SHANK2-203ENST00000409161 NHSL1Q5SYE7 1610 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 LIFP15018 202 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 FSCN3Q9NQT6 498 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 A0A1W2PPC1 479 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 PTGDSP41222 190 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms