RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ADTRPQ96IZ2 230 aa20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 CIB3Q96Q77 187 aaPredicted RBP20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 MS4A7Q9GZW8 240 aaPredicted RBP20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 FAM96BQ9Y3D0 163 aa20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 FAM90A9PA6NNJ1 464 aa20.3■□□□□ 0.84
DNMT3A-206ENST00000406659 HAPLN4Q86UW8 402 aa20.3■□□□□ 0.84
DNMT3A-206ENST00000406659 OR4S2Q8NH73 311 aa20.3■□□□□ 0.84
DNMT3A-206ENST00000406659 DTD1Q8TEA8 209 aa20.3■□□□□ 0.84
DNMT3A-206ENST00000406659 DDB2Q92466 427 aa20.3■□□□□ 0.84
DNMT3A-206ENST00000406659 NBEAQ8NFP9 2946 aa20.3■□□□□ 0.84
DNMT3A-206ENST00000406659 PKDREJQ9NTG1 2253 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 CEBPZOSA8MTT3 80 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 RNASEK-C17orf49H0YIS7 233 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 RUNX1Q01196 453 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 HFEQ30201 348 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 TMEM200BQ69YZ2 307 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 SSX9Q7RTT3 188 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 THNSL2Q86YJ6 484 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 ZNF525Q8N782 197 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 SUN5Q8TC36 379 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 ZNF714Q96N38 554 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 UQCC1Q9NVA1 299 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 TMA7Q9Y2S6 64 aaKnown RBP20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 NDUFA2O43678 99 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 OR9G9P0C7N8 305 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 DAOP14920 347 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 NQO2P16083 231 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 M6PRP20645 277 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 TMEM14EPQ6UXP3 125 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 SLC25A48Q6ZT89 311 aaKnown RBP20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 OR4A16Q8NH70 328 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 ZNF251Q9BRH9 671 aa20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 QTRT1Q9BXR0 403 aaKnown RBP20.29■□□□□ 0.84
DNMT3A-206ENST00000406659 ATRXP46100 2492 aa20.28■□□□□ 0.84
DNMT3A-206ENST00000406659 ZG16O60844 167 aa20.28■□□□□ 0.84
DNMT3A-206ENST00000406659 FCN3O75636 299 aa20.28■□□□□ 0.84
DNMT3A-206ENST00000406659 ARHGDIBP52566 201 aa20.28■□□□□ 0.84
DNMT3A-206ENST00000406659 AKR1C8PQ5T2L2 129 aa20.28■□□□□ 0.84
DNMT3A-206ENST00000406659 KAAG1Q9UBP8 84 aa20.28■□□□□ 0.84
DNMT3A-206ENST00000406659 ARFGEF3Q5TH69 2177 aa20.27■□□□□ 0.84
DNMT3A-206ENST00000406659 YLPM1P49750 1951 aaKnown RBP20.27■□□□□ 0.84
DNMT3A-206ENST00000406659 F8W036 122 aa20.27■□□□□ 0.84
DNMT3A-206ENST00000406659 DVL1O14640 695 aa20.27■□□□□ 0.84
DNMT3A-206ENST00000406659 SNCAP37840 140 aa20.27■□□□□ 0.84
DNMT3A-206ENST00000406659 DVL1P1P54792 670 aaPredicted RBP20.27■□□□□ 0.84
DNMT3A-206ENST00000406659 SLC38A11Q08AI6 406 aa20.27■□□□□ 0.84
DNMT3A-206ENST00000406659 OR8G2PQ6IF36 304 aa20.27■□□□□ 0.84
DNMT3A-206ENST00000406659 HEPN1Q6WQI6 88 aa20.27■□□□□ 0.84
DNMT3A-206ENST00000406659 ZDHHC16Q969W1 377 aa20.27■□□□□ 0.84
DNMT3A-206ENST00000406659 MED19A0JLT2 244 aaPredicted RBP20.26■□□□□ 0.83
DNMT3A-206ENST00000406659 IFNA17P01571 189 aa20.26■□□□□ 0.83
DNMT3A-206ENST00000406659 CCL3L1P16619 93 aa20.26■□□□□ 0.83
DNMT3A-206ENST00000406659 OR2B8PP59922 312 aa20.26■□□□□ 0.83
DNMT3A-206ENST00000406659 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.26■□□□□ 0.83
DNMT3A-206ENST00000406659 OR4C12Q96R67 309 aa20.26■□□□□ 0.83
DNMT3A-206ENST00000406659 CTSZQ9UBR2 303 aa20.26■□□□□ 0.83
DNMT3A-206ENST00000406659 CD5P06127 495 aa20.26■□□□□ 0.83
DNMT3A-206ENST00000406659 BTN1A1Q13410 526 aa20.26■□□□□ 0.83
DNMT3A-206ENST00000406659 VKORC1L1Q8N0U8 176 aa20.26■□□□□ 0.83
DNMT3A-206ENST00000406659 FBXO7Q9Y3I1 522 aa20.26■□□□□ 0.83
DNMT3A-206ENST00000406659 ADGRG4Q8IZF6 3080 aa20.25■□□□□ 0.83
DNMT3A-206ENST00000406659 NCOR2Q9Y618 2525 aa20.25■□□□□ 0.83
DNMT3A-206ENST00000406659 LOXP28300 417 aaPredicted RBP20.25■□□□□ 0.83
DNMT3A-206ENST00000406659 ERVFRD-1P60508 538 aa20.25■□□□□ 0.83
DNMT3A-206ENST00000406659 SPINK9Q5DT21 86 aa20.25■□□□□ 0.83
DNMT3A-206ENST00000406659 ZNF383Q8NA42 475 aa20.25■□□□□ 0.83
DNMT3A-206ENST00000406659 TMEM204Q9BSN7 226 aa20.25■□□□□ 0.83
DNMT3A-206ENST00000406659 ADCYAP1P18509 176 aa20.24■□□□□ 0.83
DNMT3A-206ENST00000406659 LRRC75BQ2VPJ9 315 aa20.24■□□□□ 0.83
DNMT3A-206ENST00000406659 AARDQ4LEZ3 155 aa20.24■□□□□ 0.83
DNMT3A-206ENST00000406659 ATRAIDQ6UW56 229 aa20.24■□□□□ 0.83
DNMT3A-206ENST00000406659 LFNGQ8NES3 379 aa20.24■□□□□ 0.83
DNMT3A-206ENST00000406659 RAB39BQ96DA2 213 aa20.24■□□□□ 0.83
DNMT3A-206ENST00000406659 TMEM140Q9NV12 185 aa20.24■□□□□ 0.83
DNMT3A-206ENST00000406659 CHD8Q9HCK8 2581 aa20.24■□□□□ 0.83
DNMT3A-206ENST00000406659 ZZEF1O43149 2961 aa20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 LY86O95711 162 aa20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 SPCS3P61009 180 aa20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 ATP6V1FQ16864 119 aa20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 C10orf91Q5T1B1 145 aa20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 CLCC1Q96S66 551 aa20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 SEC11CQ9BY50 192 aa20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 PARD6GQ9BYG4 376 aaPredicted RBP20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 CARHSP1Q9Y2V2 147 aaKnown RBP20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 PPIHO43447 177 aaKnown RBP20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 OR8U8P0C7N1 319 aa20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 TFF3Q07654 80 aa20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 PEA15Q15121 130 aa20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 DPPA3Q6W0C5 159 aa20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 SVBPQ8N300 66 aa20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 HCFC1P51610 2035 aa20.23■□□□□ 0.83
DNMT3A-206ENST00000406659 LYNX1G3V0Z9 82 aa20.22■□□□□ 0.83
DNMT3A-206ENST00000406659 H2AFB1P0C5Y9 115 aa20.22■□□□□ 0.83
DNMT3A-206ENST00000406659 LYNX1P0DP58 116 aa20.22■□□□□ 0.83
DNMT3A-206ENST00000406659 COL8A2P25067 703 aa20.22■□□□□ 0.83
DNMT3A-206ENST00000406659 PPOXP50336 477 aa20.22■□□□□ 0.83
DNMT3A-206ENST00000406659 RELBQ01201 579 aa20.22■□□□□ 0.83
DNMT3A-206ENST00000406659 GUK1Q16774 197 aa20.22■□□□□ 0.83
DNMT3A-206ENST00000406659 OR10P1Q8NGE3 313 aa20.22■□□□□ 0.83
DNMT3A-206ENST00000406659 RSG1Q9BU20 258 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms