RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	PITPNC1	Q9UKF7	332 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	ZNF708	P17019	499 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	RPS11	P62280	158 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	TMEM30B	Q3MIR4	351 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454		Q5BKY6	102 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	TMSB15B	A0A087X1C1	80 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	PRR19	A6NJB7	356 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	OR2A4	O95047	310 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	NDUFB4	O95168	129 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	MEF2B	Q02080	365 aa	Predicted RBP	11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	C1QL2	Q7Z5L3	287 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	LHFPL5	Q8TAF8	219 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	OR2A7	Q96R45	310 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	IGLV3-12	A0A075B6K2	115 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	RND2	P52198	227 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	SLC25A53	Q5H9E4	307 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	PUSL1	Q8N0Z8	303 aa	Known RBP	11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	SGMS2	Q8NHU3	365 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	LRRC75B	Q2VPJ9	315 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	DRAM1	Q8N682	238 aa		11.36	□□□□□ -0.59
CACNA1C-222	ENST00000406454	ERVH48-1	M5A8F1	160 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	SLC25A17	O43808	307 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	IFITM2	Q01629	132 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	PRNT	Q86SH4	94 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	WDFY1	Q8IWB7	410 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	OR9G1	Q8NH87	305 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	PCNX2	A6NKB5	2137 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	PPIAL4C	A0A0B4J2A2	164 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	PPIAL4G	P0DN37	164 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	LOXL3	P58215	753 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	LEAP2	Q969E1	77 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	SNRPC	P09234	159 aa	Known RBP	11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	SMIM6	P0DI80	62 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	ELOVL5	Q9NYP7	299 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	WDR90	Q96KV7	1748 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	WFDC3	Q8IUB2	231 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454		A0A0G2JMM0	328 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454		A0A1W2PPB8	328 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454		A0A1W2PRS3	328 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	KIR3DP1	A8MWS1	328 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	ID1	P41134	155 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	ZNF137P	P52743	207 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	NRN1L	Q496H8	165 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	SLC35E4	Q6ICL7	350 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	ABHD12	Q8N2K0	398 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	OR4A5	Q8NH83	315 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	MIEN1	Q9BRT3	115 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	TM2D1	Q9BX74	207 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	GFRA3	O60609	400 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	CD40	P25942	277 aa		11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	EIF4E3	Q8N5X7	224 aa	Known RBP	11.35	□□□□□ -0.59
CACNA1C-222	ENST00000406454	UMOD	P07911	640 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	MELTF	P08582	738 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	ZNF735	P0CB33	412 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	FAM3B	P58499	235 aa	Predicted RBP	11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	PQLC2	Q6ZP29	291 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	MAP1LC3C	Q9BXW4	147 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	TCF19	Q9Y242	345 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	KBTBD11	O94819	623 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	SMIM8	Q96KF7	97 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	GDF9	O60383	454 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	TMEM186	Q96B77	213 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	FBLL1	A6NHQ2	334 aa	Known RBP	11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	TP53RK	Q96S44	253 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	MIOX	Q9UGB7	285 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	NEUROG3	Q9Y4Z2	214 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	IGHV1-69-2	A0A0G2JMI3	117 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	PAFAH1B2	P68402	229 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	TIMM23B	Q5SRD1	257 aa		11.34	□□□□□ -0.59
CACNA1C-222	ENST00000406454	SSTR5	P35346	364 aa		11.33	□□□□□ -0.59
CACNA1C-222	ENST00000406454	IZUMO4	Q1ZYL8	232 aa		11.33	□□□□□ -0.59
CACNA1C-222	ENST00000406454	TRBV23-1	A0A0A0MS06	115 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	MGP	P08493	103 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	TLNRD1	Q9H1K6	362 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	KLK2	P20151	261 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454		Q6ZN92	141 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	CD8A	P01732	235 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	HTN1	P15515	57 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	MDK	P21741	143 aa	Predicted RBP	11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	UNQ5815/PRO19632	Q6UWF5	114 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	RAB24	Q969Q5	203 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	WNT9B	O14905	357 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	LYPD3	O95274	346 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	CECR9	P0C854	216 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	COX6B1	P14854	86 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	MFAP2	P55001	183 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	DYNLRB2	Q8TF09	96 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	GUCD1	Q96NT3	240 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	SCN3A	Q9NY46	2000 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	LOC102723996	A0A087X1L8	192 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	GLRX	P35754	106 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	PTPRF	P10586	1907 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	CACNA1D	Q01668	2161 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	KIAA2026	Q5HYC2	2103 aa		11.33	□□□□□ -0.6
CACNA1C-222	ENST00000406454	HOXA4	Q00056	320 aa	Predicted RBP	11.32	□□□□□ -0.6
CACNA1C-222	ENST00000406454	C1QTNF5	Q9BXJ0	243 aa		11.32	□□□□□ -0.6
CACNA1C-222	ENST00000406454	PGPEP1	Q9NXJ5	209 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms