RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 TMEM101Q96IK0 257 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 QTRT1Q9BXR0 403 aaKnown RBP10.43□□□□□ -0.74
SMCR8-201ENST00000406438 V9GYH0 126 aa10.43□□□□□ -0.74
SMCR8-201ENST00000406438 PKDREJQ9NTG1 2253 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 ZNF25P17030 456 aaPredicted RBP10.42□□□□□ -0.74
SMCR8-201ENST00000406438 C10orf128Q5T292 105 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 CBLN2Q8IUK8 224 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 RGP1Q92546 391 aaPredicted RBP10.42□□□□□ -0.74
SMCR8-201ENST00000406438 ANOS1P23352 680 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 OR4D11Q8NGI4 311 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 CTSSP25774 331 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 MPV17P39210 176 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 NDUFB4O95168 129 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 SSTR5P35346 364 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 C9orf62Q8N4C0 152 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 TNFSF18Q9UNG2 199 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 GAGE10A6NGK3 116 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 FAM209AQ5JX71 171 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 FHL5Q5TD97 284 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 GUCD1Q96NT3 240 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 TMEM229AB2RXF0 380 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 AMY1AP04745 511 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 ZP4Q12836 540 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 UNQ5815/PRO19632Q6UWF5 114 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 OR10AG1Q8NH19 301 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 RBKSQ9H477 322 aa10.42□□□□□ -0.74
SMCR8-201ENST00000406438 TICRRQ7Z2Z1 1910 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 TRAV39A0A0B4J263 110 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 CYB5R3P00387 301 aaPredicted RBP10.41□□□□□ -0.74
SMCR8-201ENST00000406438 ARL14EPLP0DKL9 152 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 FAM131CQ96AQ9 280 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 GPR82Q96P67 336 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 DDA1Q9BW61 102 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 DNAJC4Q9NNZ3 241 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 KLK13Q9UKR3 277 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 HLA-DQA1P01909 254 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 TRGC1P0CF51 173 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 TMEM177Q53S58 311 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 VAX1Q5SQQ9 334 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 OVCH2Q7RTZ1 564 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 EEF1AKMT3Q96AZ1 226 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 TXNDC17Q9BRA2 123 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 OPN3Q9H1Y3 402 aaPredicted RBP10.41□□□□□ -0.74
SMCR8-201ENST00000406438 KIF26AQ9ULI4 1882 aaPredicted RBP10.41□□□□□ -0.74
SMCR8-201ENST00000406438 ARHGAP21Q5T5U3 1957 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 VSIG8P0DPA2 414 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 RCC1P18754 421 aaPredicted RBP10.41□□□□□ -0.74
SMCR8-201ENST00000406438 PMCHL1Q16048 86 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 PCSK4Q6UW60 755 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 ALKBH7Q9BT30 221 aaPredicted RBP10.41□□□□□ -0.74
SMCR8-201ENST00000406438 WNT5BQ9H1J7 359 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 ATRXP46100 2492 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 AQP10Q96PS8 301 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 ST6GALNAC2Q9UJ37 374 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 LOC105371242A0A075B767 164 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 OR2H2O95918 312 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 NCOR1O75376 2440 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 NEU1Q99519 415 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 TRAF4Q9BUZ4 470 aaPredicted RBP10.41□□□□□ -0.74
SMCR8-201ENST00000406438 ZNF430Q9H8G1 570 aaPredicted RBP10.41□□□□□ -0.74
SMCR8-201ENST00000406438 KCNK7Q9Y2U2 307 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 RNF115Q9Y4L5 304 aa10.41□□□□□ -0.74
SMCR8-201ENST00000406438 MRPS18BQ9Y676 258 aaKnown RBP10.41□□□□□ -0.74
SMCR8-201ENST00000406438 SUMO2P61956 95 aaKnown RBP10.4□□□□□ -0.74
SMCR8-201ENST00000406438 FAM219BQ5XKK7 198 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 ZNF385AQ96PM9 386 aaKnown RBP10.4□□□□□ -0.74
SMCR8-201ENST00000406438 IGHV3-72A0A0B4J1Y9 119 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 GDF9O60383 454 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 TMEM136Q6ZRR5 245 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 UPK3AO75631 287 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 LEPROTL1O95214 131 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 HSPB9Q9BQS6 159 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 A0A1W2PPV9 198 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 THY1P04216 161 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 IGHV4-34P06331 123 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 PSG4Q00888 419 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 MEF2BQ02080 365 aaPredicted RBP10.4□□□□□ -0.74
SMCR8-201ENST00000406438 BHLHA9Q7RTU4 235 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 LIMS2Q7Z4I7 341 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 PGPEP1Q9NXJ5 209 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 EMP1P54849 157 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 FAM74A4Q5TZK3 123 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 FAM159AQ6UWV7 190 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 PQLC2Q6ZP29 291 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 C2orf16Q68DN1 1984 aa10.4□□□□□ -0.74
SMCR8-201ENST00000406438 TSPAN2O60636 221 aa10.4□□□□□ -0.75
SMCR8-201ENST00000406438 TSPAN13O95857 204 aa10.4□□□□□ -0.75
SMCR8-201ENST00000406438 PDLIM4P50479 330 aa10.4□□□□□ -0.75
SMCR8-201ENST00000406438 STARD6P59095 220 aa10.4□□□□□ -0.75
SMCR8-201ENST00000406438 TMEM45BQ96B21 275 aa10.4□□□□□ -0.75
SMCR8-201ENST00000406438 CCL27Q9Y4X3 112 aa10.4□□□□□ -0.75
SMCR8-201ENST00000406438 SPINT1O43278 529 aa10.4□□□□□ -0.75
SMCR8-201ENST00000406438 PATE3B3GLJ2 98 aa10.39□□□□□ -0.75
SMCR8-201ENST00000406438 PAPPA-AS1Q5QFB9 102 aa10.39□□□□□ -0.75
SMCR8-201ENST00000406438 OR13C6PQ8NH95 151 aa10.39□□□□□ -0.75
SMCR8-201ENST00000406438 LOXL4Q96JB6 756 aa10.39□□□□□ -0.75
SMCR8-201ENST00000406438 PRELID3AQ96N28 172 aa10.39□□□□□ -0.75
SMCR8-201ENST00000406438 IDI2-AS1Q9NZ38 188 aa10.39□□□□□ -0.75
SMCR8-201ENST00000406438 SCTP09683 121 aa10.39□□□□□ -0.75
SMCR8-201ENST00000406438 FTH1P19P0C7X4 201 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms