RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 IGHV1-18A0A0C4DH31 117 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 OR5H1A6NKK0 313 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 M0R296 226 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 CLDN14O95500 239 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 S100GP29377 79 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 NDUFA6P56556 154 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 RPL23P62829 140 aaKnown RBP8.18□□□□□ -1.1
MSH2-202ENST00000406134 HBG1P69891 147 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 HBG2P69892 147 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 PNRC1Q12796 327 aaPredicted RBP8.18□□□□□ -1.1
MSH2-202ENST00000406134 TMEM164Q5U3C3 297 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 ZBTB34Q8NCN2 500 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 TCEAL7Q9BRU2 100 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 SLC25A22Q9H936 323 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 MSL2Q9HCI7 577 aa8.18□□□□□ -1.1
MSH2-202ENST00000406134 ZNF891A8MT65 544 aaPredicted RBP8.17□□□□□ -1.1
MSH2-202ENST00000406134 ARG2P78540 354 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 MEF2BQ02080 365 aaPredicted RBP8.17□□□□□ -1.1
MSH2-202ENST00000406134 PRSS8Q16651 343 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 CR1LQ2VPA4 569 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 CYP2G1PQ6ZSU1 146 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 RNASE11Q8TAA1 199 aaKnown RBP8.17□□□□□ -1.1
MSH2-202ENST00000406134 SCGB1C1Q8TD33 95 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 TCTEX1D2Q8WW35 142 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 TRIB1Q96RU8 372 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 ELOVL1Q9BW60 279 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 QTRT1Q9BXR0 403 aaKnown RBP8.17□□□□□ -1.1
MSH2-202ENST00000406134 GPR61Q9BZJ8 451 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 SPTA1P02549 2419 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 NKX2-8O15522 239 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 CLDN1O95832 211 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 LOXL3P58215 753 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 RTP5Q14D33 572 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 PDLIM3Q53GG5 364 aaPredicted RBP8.17□□□□□ -1.1
MSH2-202ENST00000406134 GCSAMLQ5JQS6 135 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 NCR3LG1Q68D85 454 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 LOXL4Q96JB6 756 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 FAM210BQ96KR6 192 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 ZNF729A6NN14 1252 aaPredicted RBP8.17□□□□□ -1.1
MSH2-202ENST00000406134 CEBPZOSA8MTT3 80 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 RAB29O14966 203 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 MBNL2Q5VZF2 373 aaKnown RBP8.17□□□□□ -1.1
MSH2-202ENST00000406134 LRP11Q86VZ4 500 aa8.17□□□□□ -1.1
MSH2-202ENST00000406134 IGHV2OR16-5A0A0B4J2B6 119 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 PIGBOS1A0A0B4J2F0 54 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 DEFB108AA8MXU0 73 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 SEC14L6B5MCN3 397 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 KBTBD11O94819 623 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 PAX1P15863 534 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 C16orf82Q7Z2V1 217 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 DTD1Q8TEA8 209 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 PINX1Q96BK5 328 aaKnown RBP8.16□□□□□ -1.1
MSH2-202ENST00000406134 CXXC4Q9H2H0 198 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 MARCH11A6NNE9 402 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 DUTP33316 252 aaKnown RBP8.16□□□□□ -1.1
MSH2-202ENST00000406134 GNB2P62879 340 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 OR51G1Q8NGK1 321 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 TMEM147Q9BVK8 224 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 PARLQ9H300 379 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 OBP2BQ9NPH6 170 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 ASCL3Q9NQ33 180 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 RNF212BA8MTL3 300 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 USF2Q15853 346 aaPredicted RBP8.16□□□□□ -1.1
MSH2-202ENST00000406134 OR4X1Q8NH49 305 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 DDB2Q92466 427 aa8.16□□□□□ -1.1
MSH2-202ENST00000406134 TRAV3A0A0B4J244 114 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 CLDN34H7C241 214 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 IFNL4K9M1U5 179 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 MBP02144 154 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 CGB3P0DN86 165 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 CGB7P0DN87 165 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 FGF7P21781 194 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 UBE2NP61088 152 aaKnown RBP8.15□□□□□ -1.1
MSH2-202ENST00000406134 HTD2P86397 168 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 SLC25A24Q6NUK1 477 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 UNQ6494/PRO21346Q6UXR6 183 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 TCF23Q7RTU1 214 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 C1orf162Q8NEQ5 155 aaPredicted RBP8.15□□□□□ -1.1
MSH2-202ENST00000406134 RFESDQ8TAC1 157 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 ZNF71Q9NQZ8 489 aaPredicted RBP8.15□□□□□ -1.1
MSH2-202ENST00000406134 PLSCR4Q9NRQ2 329 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.15□□□□□ -1.1
MSH2-202ENST00000406134 OR6C3Q9NZP0 311 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 DMRT1Q9Y5R6 373 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 CTXND1A0A1B0GTU2 59 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 PRSS47A8MTI9 375 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 AQP7O14520 342 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 TCAPO15273 167 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 SLC31A2O15432 143 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 VDAC2P45880 294 aaPredicted RBP8.15□□□□□ -1.1
MSH2-202ENST00000406134 PIP4P1Q86T03 277 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 LHX4Q969G2 390 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 RAB24Q969Q5 203 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 STARD4Q96DR4 205 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 TAAR6Q96RI8 345 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 IFI27L2Q9H2X8 130 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 RBM7Q9Y580 266 aaKnown RBP8.15□□□□□ -1.1
MSH2-202ENST00000406134 ZNF292O60281 2723 aa8.15□□□□□ -1.1
MSH2-202ENST00000406134 GABRA2P47869 451 aa8.15□□□□□ -1.11
MSH2-202ENST00000406134 SPCS3P61009 180 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms