RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 PRELID3BQ9Y3B1 194 aa13.71□□□□□ -0.21
IRF1-202ENST00000405885 IGHV2-70DA0A0C4DH43 119 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 hCG_1809904A0A1W2PP81 198 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 A0A1W2PPE2 198 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 A0A1W2PR64 198 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 A0A1W2PRV1 198 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 L7N2F9 121 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 NDUFS8O00217 210 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 ENSAO43768 121 aaKnown RBP13.7□□□□□ -0.22
IRF1-202ENST00000405885 DEDDO75618 318 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 P0C879 139 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 TAGLNQ01995 201 aaKnown RBP13.7□□□□□ -0.22
IRF1-202ENST00000405885 CLEC12BQ2HXU8 276 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 THOC7Q6I9Y2 204 aaKnown RBP13.7□□□□□ -0.22
IRF1-202ENST00000405885 PRSS54Q6PEW0 395 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 TNFRSF14Q92956 283 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 LSM10Q969L4 123 aaKnown RBP13.7□□□□□ -0.22
IRF1-202ENST00000405885 R3HDM4Q96D70 268 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 PCGF1Q9BSM1 259 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 IGHV3-72A0A0B4J1Y9 119 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 A8MXK9 166 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 BUB1B-PAK6H3BSN5 160 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 PITX3O75364 302 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 NKX2-1P43699 371 aaPredicted RBP13.7□□□□□ -0.22
IRF1-202ENST00000405885 THBS3P49746 956 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 MMP24Q9Y5R2 645 aa13.7□□□□□ -0.22
IRF1-202ENST00000405885 PDZD2O15018 2839 aa13.69□□□□□ -0.22
IRF1-202ENST00000405885 M0R1W7 72 aa13.69□□□□□ -0.22
IRF1-202ENST00000405885 SSSCA1O60232 199 aa13.69□□□□□ -0.22
IRF1-202ENST00000405885 HPRT1P00492 218 aa13.69□□□□□ -0.22
IRF1-202ENST00000405885 SMCO1Q147U7 214 aa13.69□□□□□ -0.22
IRF1-202ENST00000405885 TMEM65Q6PI78 240 aa13.69□□□□□ -0.22
IRF1-202ENST00000405885 CLEC9AQ6UXN8 241 aa13.69□□□□□ -0.22
IRF1-202ENST00000405885 CD300LFQ8TDQ1 290 aa13.69□□□□□ -0.22
IRF1-202ENST00000405885 ARL6Q9H0F7 186 aa13.69□□□□□ -0.22
IRF1-202ENST00000405885 PLEKHA2Q9HB19 425 aa13.69□□□□□ -0.22
IRF1-202ENST00000405885 TRAV3A0A0B4J244 114 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 A0A1B0GU03 582 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 H0YJW9 148 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 ARG1P05089 322 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 PRTN3P24158 256 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 ZNF137PP52743 207 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 TMUB2Q71RG4 321 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 LHFPL4Q7Z7J7 247 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 TCTEX1D1Q8N7M0 179 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 MAPK1IP1LQ8NDC0 245 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 DMBX1Q8NFW5 382 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 TMEM186Q96B77 213 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 SPIN2AQ99865 258 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 SPIN2BQ9BPZ2 258 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 HEXA-AS1Q9H8Q6 139 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 SRRM4A7MD48 611 aaKnown RBP13.68□□□□□ -0.22
IRF1-202ENST00000405885 RNASEK-C17orf49H0YIS7 233 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 H7C2Y5 167 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 ST8SIA3O43173 380 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 TMEM50AO95807 157 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 OR9G9P0C7N8 305 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 LYL1P12980 280 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 PRRX1P54821 245 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 OR2B8PP59922 312 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 TGIF2LXQ8IUE1 241 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 OR4S2Q8NH73 311 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 NABP2Q9BQ15 211 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 SIRPDQ9H106 197 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 SLC35D1Q9NTN3 355 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 POMT1Q9Y6A1 747 aa13.68□□□□□ -0.22
IRF1-202ENST00000405885 AKAP9Q99996 3911 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 RBFOX2O43251 390 aaKnown RBP eCLIP13.67□□□□□ -0.22
IRF1-202ENST00000405885 MMP9P14780 707 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 ID3Q02535 119 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 MIDNQ504T8 468 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 H2BFWTQ7Z2G1 175 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 BEND2Q8NDZ0 799 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 OR5AN1Q8NGI8 311 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 OR13D1Q8NGV5 346 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 C17orf50Q8WW18 174 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 RITA1Q96K30 269 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 FAM212BQ9NTI7 297 aaPredicted RBP13.67□□□□□ -0.22
IRF1-202ENST00000405885 FOXH1O75593 365 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 PET100P0DJ07 73 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 HOXB4P17483 251 aaPredicted RBP13.67□□□□□ -0.22
IRF1-202ENST00000405885 OPCMLQ14982 345 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 DEFB113Q30KQ7 82 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 SPINK9Q5DT21 86 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 INO80EQ8NBZ0 244 aaPredicted RBP13.67□□□□□ -0.22
IRF1-202ENST00000405885 ADTRPQ96IZ2 230 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 TBX15Q96SF7 602 aa13.67□□□□□ -0.22
IRF1-202ENST00000405885 CHST1O43916 411 aa13.66□□□□□ -0.22
IRF1-202ENST00000405885 TOX4O94842 621 aa13.66□□□□□ -0.22
IRF1-202ENST00000405885 NQO2P16083 231 aa13.66□□□□□ -0.22
IRF1-202ENST00000405885 S100A11P31949 105 aa13.66□□□□□ -0.22
IRF1-202ENST00000405885 ACOT7LQ6ZUV0 252 aa13.66□□□□□ -0.22
IRF1-202ENST00000405885 OR11H6Q8NGC7 330 aa13.66□□□□□ -0.22
IRF1-202ENST00000405885 RHOVQ96L33 236 aa13.66□□□□□ -0.22
IRF1-202ENST00000405885 TMEM140Q9NV12 185 aa13.66□□□□□ -0.22
IRF1-202ENST00000405885 HILPDAQ9Y5L2 63 aa13.66□□□□□ -0.22
IRF1-202ENST00000405885 KPTNQ9Y664 436 aa13.66□□□□□ -0.22
IRF1-202ENST00000405885 RBMXL2O75526 392 aaKnown RBP13.65□□□□□ -0.22
IRF1-202ENST00000405885 SLC25A6P12236 298 aa13.65□□□□□ -0.22
IRF1-202ENST00000405885 KIR2DS2P43631 304 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms