RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 FCGR3BO75015 233 aa17.13■□□□□ 0.33
TPM1-208ENST00000404484 OR2F2O95006 317 aa17.13■□□□□ 0.33
TPM1-208ENST00000404484 SCGB1D2O95969 90 aa17.13■□□□□ 0.33
TPM1-208ENST00000404484 HPRT1P00492 218 aa17.13■□□□□ 0.33
TPM1-208ENST00000404484 ZNF137PP52743 207 aa17.13■□□□□ 0.33
TPM1-208ENST00000404484 OR2F1Q13607 317 aa17.13■□□□□ 0.33
TPM1-208ENST00000404484 ZNF345Q14585 488 aa17.13■□□□□ 0.33
TPM1-208ENST00000404484 C1orf122Q6ZSJ8 110 aa17.13■□□□□ 0.33
TPM1-208ENST00000404484 DDB2Q92466 427 aa17.13■□□□□ 0.33
TPM1-208ENST00000404484 GON7Q9BXV9 100 aa17.13■□□□□ 0.33
TPM1-208ENST00000404484 IGHV4-30-2A0A087WSY4 118 aa17.12■□□□□ 0.33
TPM1-208ENST00000404484 IGHV2-26A0A0B4J1V2 119 aa17.12■□□□□ 0.33
TPM1-208ENST00000404484 A0A0D9SG52 128 aa17.12■□□□□ 0.33
TPM1-208ENST00000404484 KIAA1324LA8MWY0 1029 aaPredicted RBP17.12■□□□□ 0.33
TPM1-208ENST00000404484 RNF223E7ERA6 249 aa17.12■□□□□ 0.33
TPM1-208ENST00000404484 S1PR2O95136 353 aa17.12■□□□□ 0.33
TPM1-208ENST00000404484 IGKV1-5P01602 117 aa17.12■□□□□ 0.33
TPM1-208ENST00000404484 NKX2-1P43699 371 aaPredicted RBP17.12■□□□□ 0.33
TPM1-208ENST00000404484 ACOT7LQ6ZUV0 252 aa17.12■□□□□ 0.33
TPM1-208ENST00000404484 BEND2Q8NDZ0 799 aa17.12■□□□□ 0.33
TPM1-208ENST00000404484 OR13D1Q8NGV5 346 aa17.12■□□□□ 0.33
TPM1-208ENST00000404484 GPR146Q96CH1 333 aa17.12■□□□□ 0.33
TPM1-208ENST00000404484 RNF126Q9BV68 326 aa17.12■□□□□ 0.33
TPM1-208ENST00000404484 AMMECR1Q9Y4X0 333 aaPredicted RBP17.12■□□□□ 0.33
TPM1-208ENST00000404484 POMT1Q9Y6A1 747 aa17.12■□□□□ 0.33
TPM1-208ENST00000404484 FOXH1O75593 365 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 DEDDO75618 318 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 MBPP02686 304 aaPredicted RBP17.11■□□□□ 0.33
TPM1-208ENST00000404484 CXCL2P19875 107 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 BRWD1-AS2P59051 145 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 LMO4P61968 165 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 DHRS7BQ6IAN0 325 aaPredicted RBP17.11■□□□□ 0.33
TPM1-208ENST00000404484 OR1S1Q8NH92 325 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 REG4Q9BYZ8 158 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 SLA2Q9H6Q3 261 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 COA4Q9NYJ1 87 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 LSM5Q9Y4Y9 91 aaKnown RBP17.11■□□□□ 0.33
TPM1-208ENST00000404484 ABCA1O95477 2261 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 H0YIZ8 118 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 K7EPK0 472 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 RRASP10301 218 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 EPHA1P21709 976 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 S100A11P31949 105 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 ERVK-16P61578 105 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 RTL8BQ17RB0 113 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 FOXRED2Q8IWF2 684 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 FAM71E2Q8N5Q1 922 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 MAPK1IP1LQ8NDC0 245 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 KPTNQ9Y664 436 aa17.11■□□□□ 0.33
TPM1-208ENST00000404484 E5RGE8 158 aa17.1■□□□□ 0.33
TPM1-208ENST00000404484 KRASP01116 189 aa17.1■□□□□ 0.33
TPM1-208ENST00000404484 APOA2P02652 100 aa17.1■□□□□ 0.33
TPM1-208ENST00000404484 PVALBP20472 110 aaPredicted RBP17.1■□□□□ 0.33
TPM1-208ENST00000404484 ARHGDIBP52566 201 aa17.1■□□□□ 0.33
TPM1-208ENST00000404484 ARF6P62330 175 aa17.1■□□□□ 0.33
TPM1-208ENST00000404484 HEXA-AS1Q9H8Q6 139 aa17.1■□□□□ 0.33
TPM1-208ENST00000404484 OR5AC2Q9NZP5 309 aa17.1■□□□□ 0.33
TPM1-208ENST00000404484 CACNG5Q9UF02 275 aa17.1■□□□□ 0.33
TPM1-208ENST00000404484 NSG2Q9Y328 171 aa17.1■□□□□ 0.33
TPM1-208ENST00000404484 A0A0G2JRQ6 117 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 VWC2LB2RUY7 222 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 PITX3O75364 302 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 IGLV1-47P01700 117 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 PRTN3P24158 256 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 G6PCP35575 357 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 LINC00205P59089 165 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 HLA-DRB5Q30154 266 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 C1orf229Q6ZS94 237 aaPredicted RBP17.09■□□□□ 0.33
TPM1-208ENST00000404484 TMUB2Q71RG4 321 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 H2BFWTQ7Z2G1 175 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 KCNRGQ8N5I3 272 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 ZNF383Q8NA42 475 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 R3HDM4Q96D70 268 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 PCGF1Q9BSM1 259 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 ARL6Q9H0F7 186 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 ZNRD1Q9P1U0 126 aa17.09■□□□□ 0.33
TPM1-208ENST00000404484 IGHV2-70DA0A0C4DH43 119 aa17.08■□□□□ 0.32
TPM1-208ENST00000404484 MARCH11A6NNE9 402 aa17.08■□□□□ 0.32
TPM1-208ENST00000404484 FAM90A9PA6NNJ1 464 aa17.08■□□□□ 0.32
TPM1-208ENST00000404484 WRBO00258 174 aa17.08■□□□□ 0.32
TPM1-208ENST00000404484 CT45A6P0DMU7 189 aa17.08■□□□□ 0.32
TPM1-208ENST00000404484 CT45A5P0DMU8 189 aa17.08■□□□□ 0.32
TPM1-208ENST00000404484 CT45A7P0DMV0 189 aa17.08■□□□□ 0.32
TPM1-208ENST00000404484 NQO2P16083 231 aa17.08■□□□□ 0.32
TPM1-208ENST00000404484 ZFP36P26651 326 aaKnown RBP17.08■□□□□ 0.32
TPM1-208ENST00000404484 ID3Q02535 119 aa17.08■□□□□ 0.32
TPM1-208ENST00000404484 OPCMLQ14982 345 aa17.08■□□□□ 0.32
TPM1-208ENST00000404484 Q8N7P7 452 aa17.08■□□□□ 0.32
TPM1-208ENST00000404484 ST6GALNAC6Q969X2 333 aa17.08■□□□□ 0.32
TPM1-208ENST00000404484 AIFM2Q9BRQ8 373 aa17.08■□□□□ 0.32
TPM1-208ENST00000404484 SLC35D1Q9NTN3 355 aa17.08■□□□□ 0.32
TPM1-208ENST00000404484 NIPBLQ6KC79 2804 aaeCLIP17.07■□□□□ 0.32
TPM1-208ENST00000404484 RNF222A6NCQ9 220 aa17.07■□□□□ 0.32
TPM1-208ENST00000404484 FAM90A26D6RGX4 464 aa17.07■□□□□ 0.32
TPM1-208ENST00000404484 TXNL1O43396 289 aa17.07■□□□□ 0.32
TPM1-208ENST00000404484 P0C879 139 aa17.07■□□□□ 0.32
TPM1-208ENST00000404484 MMP9P14780 707 aa17.07■□□□□ 0.32
TPM1-208ENST00000404484 LCN2P80188 198 aa17.07■□□□□ 0.32
TPM1-208ENST00000404484 TGIF2LXQ8IUE1 241 aa17.07■□□□□ 0.32
TPM1-208ENST00000404484 AQP10Q96PS8 301 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms