RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 SSMEM1Q8WWF3 244 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 FLYWCH2Q96CP2 140 aaKnown RBP9.88□□□□□ -0.83
LINC00339-201ENST00000404210 EAF1Q96JC9 268 aaPredicted RBP9.88□□□□□ -0.83
LINC00339-201ENST00000404210 MARVELD1Q9BSK0 173 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 LIN7CQ9NUP9 197 aaKnown RBP9.88□□□□□ -0.83
LINC00339-201ENST00000404210 NUDT15Q9NV35 164 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 POMT1Q9Y6A1 747 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 CELSR1Q9NYQ6 3014 aa9.88□□□□□ -0.83
LINC00339-201ENST00000404210 ANK3Q12955 4377 aaKnown RBP9.88□□□□□ -0.83
LINC00339-201ENST00000404210 INMT-MINDY4F8WBC2 141 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 H0Y980 276 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 H3BUX3 64 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 IGKV1D-33P01593 117 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 IGKV1-33P01594 117 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 OR4E1P0C645 316 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 RPA2P15927 270 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 CD24P25063 80 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 LPAR6P43657 344 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 LGALS7P47929 136 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 RPS16P62249 146 aaKnown RBP9.87□□□□□ -0.83
LINC00339-201ENST00000404210 SUPT4H1P63272 117 aaKnown RBP9.87□□□□□ -0.83
LINC00339-201ENST00000404210 HES1Q14469 280 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 ZNF585BQ52M93 769 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 CCBE1Q6UXH8 406 aaPredicted RBP9.87□□□□□ -0.83
LINC00339-201ENST00000404210 Q8N6K4 173 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 OR4S2Q8NH73 311 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 OSR1Q8TAX0 266 aaPredicted RBP9.87□□□□□ -0.83
LINC00339-201ENST00000404210 AIFM2Q9BRQ8 373 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 PITPNC1Q9UKF7 332 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 TCF19Q9Y242 345 aa9.87□□□□□ -0.83
LINC00339-201ENST00000404210 A0A0A6YYJ9 748 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 A6NDX4 124 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 BTBD17A6NE02 478 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 HOXA3O43365 443 aaPredicted RBP9.86□□□□□ -0.83
LINC00339-201ENST00000404210 PEX14O75381 377 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 SFT2D2O95562 160 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 DHFRP00374 187 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 IGHV4-59P01825 116 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 IGKV1-16P04430 117 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 IL5P05113 134 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 ANXA3P12429 323 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 SPNP16150 400 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 TMEM11P17152 192 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 ANXA7P20073 488 aaKnown RBP9.86□□□□□ -0.83
LINC00339-201ENST00000404210 UCP1P25874 307 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 TMEM187Q14656 261 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 OXA1LQ15070 435 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 MINDY2Q8NBR6 621 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 OR8H1Q8NGG4 311 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 GLYATL2Q8WU03 294 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 JMJD8Q96S16 334 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 TP53RKQ96S44 253 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 TMEM222Q9H0R3 208 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 PLEKHA2Q9HB19 425 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 SVEP1Q4LDE5 3571 aa9.86□□□□□ -0.83
LINC00339-201ENST00000404210 C9orf170A2RU37 121 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 CLDN34H7C241 214 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 SHOXO15266 292 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 RAMP3O60896 148 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 CDS2O95674 445 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 CRYZL1O95825 349 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 HRASP01112 189 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 IFNA2P01563 188 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 SERPINE2P07093 398 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 OR5AC1P0C628 307 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 VSIG10L2P0DP72 767 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 PPP1R1AQ13522 171 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 HNF4GQ14541 408 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 SP6Q3SY56 376 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 OR2B11Q5JQS5 317 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 LIAT1Q6ZQX7 453 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 C16orf82Q7Z2V1 217 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 LYG2Q86SG7 212 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 CADM3Q8N126 398 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 NPBQ8NG41 125 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 RITA1Q96K30 269 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 TMEM56Q96MV1 263 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 RBM14Q96PK6 669 aaKnown RBP9.85□□□□□ -0.83
LINC00339-201ENST00000404210 TSNAXQ99598 290 aaKnown RBP9.85□□□□□ -0.83
LINC00339-201ENST00000404210 PLSCR3Q9NRY6 295 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 C1RLQ9NZP8 487 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 COMMD9Q9P000 198 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 TMEM56-RWDD3S4R434 201 aa9.85□□□□□ -0.83
LINC00339-201ENST00000404210 SONP18583 2426 aaKnown RBP9.85□□□□□ -0.83
LINC00339-201ENST00000404210 PIGBOS1A0A0B4J2F0 54 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 SRRM4A7MD48 611 aaKnown RBP9.84□□□□□ -0.83
LINC00339-201ENST00000404210 PRAF2O60831 178 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 OR2F2O95006 317 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 NQO2P16083 231 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 VAMP1P23763 118 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 RAB25P57735 213 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 HILS1P60008 231 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 DHRS2Q13268 280 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 SLC9A3R2Q15599 337 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 LY6EQ16553 131 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 POU2AF1Q16633 256 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 TRIM16LQ309B1 348 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 C4orf46Q504U0 113 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 CHPT1Q8WUD6 406 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 IL22RA2Q969J5 263 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms