RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 C5orf30Q96GV9 206 aa13.11□□□□□ -0.31
CSNK1D-205ENST00000403276 ABHD1Q96SE0 405 aa13.11□□□□□ -0.31
CSNK1D-205ENST00000403276 GINS4Q9BRT9 223 aa13.11□□□□□ -0.31
CSNK1D-205ENST00000403276 ST6GALNAC5Q9BVH7 336 aa13.11□□□□□ -0.31
CSNK1D-205ENST00000403276 SDHAF2Q9NX18 166 aa13.11□□□□□ -0.31
CSNK1D-205ENST00000403276 METTL1Q9UBP6 276 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-205ENST00000403276 GAB2Q9UQC2 676 aa13.11□□□□□ -0.31
CSNK1D-205ENST00000403276 FABP12A6NFH5 140 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 J3QRK9 145 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 SSX5O60225 188 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 RBBP9O75884 186 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 DUS4LO95620 317 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 EGR2P11161 476 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 ETV6P41212 452 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 IL18Q14116 193 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 KIAA0141Q14154 515 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 ECSCRQ19T08 205 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 ZNF660Q6AZW8 331 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 PYHIN1Q6K0P9 492 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 TMEM65Q6PI78 240 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 SNX29P2Q8IUI4 249 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 ABHD5Q8WTS1 349 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 CASTOR1Q8WTX7 329 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 C15orf40Q8WUR7 153 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 RNF5Q99942 180 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 FAM103A1Q9BTL3 118 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 SLC35D1Q9NTN3 355 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 RABL2AQ9UBK7 228 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 RABL2BQ9UNT1 228 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 RBM7Q9Y580 266 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 V9GYH0 126 aa13.1□□□□□ -0.31
CSNK1D-205ENST00000403276 IGLV1-40P01703 118 aa13.09□□□□□ -0.31
CSNK1D-205ENST00000403276 APOA2P02652 100 aa13.09□□□□□ -0.31
CSNK1D-205ENST00000403276 DTYMKP23919 212 aa13.09□□□□□ -0.31
CSNK1D-205ENST00000403276 PRSS3P35030 304 aa13.09□□□□□ -0.31
CSNK1D-205ENST00000403276 SRSF7Q16629 238 aaKnown RBP eCLIP13.09□□□□□ -0.31
CSNK1D-205ENST00000403276 Q6ZS49 121 aa13.09□□□□□ -0.31
CSNK1D-205ENST00000403276 PDPNQ86YL7 162 aa13.09□□□□□ -0.31
CSNK1D-205ENST00000403276 H1FOOQ8IZA3 346 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-205ENST00000403276 ZNF491Q8N8L2 437 aa13.09□□□□□ -0.31
CSNK1D-205ENST00000403276 MINDY2Q8NBR6 621 aa13.09□□□□□ -0.31
CSNK1D-205ENST00000403276 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-205ENST00000403276 FLYWCH2Q96CP2 140 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-205ENST00000403276 OR5B12Q96R08 314 aa13.09□□□□□ -0.31
CSNK1D-205ENST00000403276 GNB4Q9HAV0 340 aa13.09□□□□□ -0.31
CSNK1D-205ENST00000403276 TPSG1Q9NRR2 321 aa13.09□□□□□ -0.31
CSNK1D-205ENST00000403276 A0A1W2PN81 502 aa13.08□□□□□ -0.32
CSNK1D-205ENST00000403276 SLC25A17O43808 307 aa13.08□□□□□ -0.32
CSNK1D-205ENST00000403276 SOX15O60248 233 aa13.08□□□□□ -0.32
CSNK1D-205ENST00000403276 DIRAS3O95661 229 aa13.08□□□□□ -0.32
CSNK1D-205ENST00000403276 CHRNA7P36544 502 aa13.08□□□□□ -0.32
CSNK1D-205ENST00000403276 RAB9AP51151 201 aa13.08□□□□□ -0.32
CSNK1D-205ENST00000403276 C19orf54Q5BKX5 351 aa13.08□□□□□ -0.32
CSNK1D-205ENST00000403276 SPANXN2Q5MJ10 180 aa13.08□□□□□ -0.32
CSNK1D-205ENST00000403276 BVESQ8NE79 360 aa13.08□□□□□ -0.32
CSNK1D-205ENST00000403276 MYOZ3Q8TDC0 251 aa13.08□□□□□ -0.32
CSNK1D-205ENST00000403276 C4orf3Q8WVX3 66 aa13.08□□□□□ -0.32
CSNK1D-205ENST00000403276 TSNAXQ99598 290 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-205ENST00000403276 SCPEP1Q9HB40 452 aa13.08□□□□□ -0.32
CSNK1D-205ENST00000403276 NUBP2Q9Y5Y2 271 aa13.08□□□□□ -0.32
CSNK1D-205ENST00000403276 WI2-2373I1.2A0A1W2PRP0 233 aa13.07□□□□□ -0.32
CSNK1D-205ENST00000403276 MEIS3P1A6NDR6 274 aa13.07□□□□□ -0.32
CSNK1D-205ENST00000403276 K7EIL1 84 aa13.07□□□□□ -0.32
CSNK1D-205ENST00000403276 SULT1C2O00338 296 aa13.07□□□□□ -0.32
CSNK1D-205ENST00000403276 CTDSPLO15194 276 aa13.07□□□□□ -0.32
CSNK1D-205ENST00000403276 CA2P00918 260 aa13.07□□□□□ -0.32
CSNK1D-205ENST00000403276 PTBP1P26599 531 aaKnown RBP eCLIP13.07□□□□□ -0.32
CSNK1D-205ENST00000403276 MRPS10P82664 201 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-205ENST00000403276 ZNF79Q15937 498 aa13.07□□□□□ -0.32
CSNK1D-205ENST00000403276 PPP1R27Q86WC6 154 aa13.07□□□□□ -0.32
CSNK1D-205ENST00000403276 OR11H1Q8NG94 326 aa13.07□□□□□ -0.32
CSNK1D-205ENST00000403276 GPX8Q8TED1 209 aa13.07□□□□□ -0.32
CSNK1D-205ENST00000403276 TNCP24821 2201 aa13.07□□□□□ -0.32
CSNK1D-205ENST00000403276 GABARAPH6UMI1 98 aa13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 IGLV2-23P01705 113 aa13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 NFYAP23511 347 aaPredicted RBP13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 CBX5P45973 191 aa13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 CRIP2P52943 208 aaPredicted RBP13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 EGFEM1PQ0D2K5 195 aa13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 PJVKQ0ZLH3 352 aa13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 UNQ5815/PRO19632Q6UWF5 114 aa13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 ZNF562Q6V9R5 426 aa13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 GVQW1Q8N7I0 195 aa13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 LFNGQ8NES3 379 aa13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 UBE2E2Q96LR5 201 aa13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 MCRIP2Q9BUT9 160 aaKnown RBP13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 AKIP1Q9NQ31 210 aa13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 FOXA2Q9Y261 457 aaPredicted RBP13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 VSIG4Q9Y279 399 aa13.06□□□□□ -0.32
CSNK1D-205ENST00000403276 SRRM4A7MD48 611 aaKnown RBP13.05□□□□□ -0.32
CSNK1D-205ENST00000403276 LINC00473A8K010 186 aa13.05□□□□□ -0.32
CSNK1D-205ENST00000403276 I3L521 148 aa13.05□□□□□ -0.32
CSNK1D-205ENST00000403276 ARPC1BO15143 372 aaKnown RBP13.05□□□□□ -0.32
CSNK1D-205ENST00000403276 SPDEFO95238 335 aa13.05□□□□□ -0.32
CSNK1D-205ENST00000403276 GNB1P62873 340 aa13.05□□□□□ -0.32
CSNK1D-205ENST00000403276 ZNF45Q02386 682 aa13.05□□□□□ -0.32
CSNK1D-205ENST00000403276 TMEM267Q0VDI3 215 aaPredicted RBP13.05□□□□□ -0.32
CSNK1D-205ENST00000403276 RNASE12Q5GAN4 147 aaKnown RBP13.05□□□□□ -0.32
CSNK1D-205ENST00000403276 HOGA1Q86XE5 327 aa13.05□□□□□ -0.32
CSNK1D-205ENST00000403276 MFSD4AQ8N468 514 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms