RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 LHFPL4Q7Z7J7 247 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 NEIL1Q96FI4 390 aaPredicted RBP9.56□□□□□ -0.88
SKA3-203ENST00000400018 OR10C1Q96KK4 312 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 SSX3Q99909 188 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 RIMS4Q9H426 269 aaPredicted RBP9.56□□□□□ -0.88
SKA3-203ENST00000400018 PATZ1Q9HBE1 687 aaKnown RBP9.56□□□□□ -0.88
SKA3-203ENST00000400018 GSKIPQ9P0R6 139 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 NSG2Q9Y328 171 aa9.56□□□□□ -0.88
SKA3-203ENST00000400018 hADV38S2A0JD32 116 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 C17orf98A8MV24 154 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 PGLYRP1O75594 196 aaPredicted RBP9.55□□□□□ -0.88
SKA3-203ENST00000400018 SPINK9Q5DT21 86 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 NCR3LG1Q68D85 454 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 LYG2Q86SG7 212 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 Q8N7P7 452 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 OR2AK2Q8NG84 335 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 LURAP1Q96LR2 239 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 BARX1Q9HBU1 254 aaPredicted RBP9.55□□□□□ -0.88
SKA3-203ENST00000400018 OR6C3Q9NZP0 311 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 SAA2-SAA4A0A096LPE2 208 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 IGHV2-5P01817 119 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 SAA2P0DJI9 122 aaPredicted RBP9.55□□□□□ -0.88
SKA3-203ENST00000400018 TBPP20226 339 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 GZMHP20718 246 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 CLEC12BQ2HXU8 276 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 LY6G6FQ5SQ64 297 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 CLEC9AQ6UXN8 241 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 WFDC11Q8NEX6 87 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 ALX4Q9H161 411 aaPredicted RBP9.55□□□□□ -0.88
SKA3-203ENST00000400018 IFI27L2Q9H2X8 130 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 IDI2-AS1Q9NZ38 188 aa9.55□□□□□ -0.88
SKA3-203ENST00000400018 TEP1Q99973 2627 aaKnown RBP9.55□□□□□ -0.88
SKA3-203ENST00000400018 TMEM218A2RU14 115 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 M0R1X1 148 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 SMAD7O15105 426 aaKnown RBP9.54□□□□□ -0.88
SKA3-203ENST00000400018 MPPED1O15442 326 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 MYOD1P15172 320 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 TMEM128Q5BJH2 165 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 CDPF1Q6NVV7 123 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 ODF3L1Q8IXM7 274 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 TCEAL7Q9BRU2 100 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 GFOD1Q9NXC2 390 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 ZNF107Q9UII5 783 aaPredicted RBP9.54□□□□□ -0.88
SKA3-203ENST00000400018 LOC105371242A0A075B767 164 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 C5orf51A6NDU8 294 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 C1orf196B1AJZ1 125 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 NPIPB11E5RHQ5 1161 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 IGKV1-39P01597 117 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 IGKV1D-39P04432 117 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 DLX6P56179 175 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 TMEM155Q4W5P6 130 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 C10orf105Q8TEF2 133 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 RITA1Q96K30 269 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 RSRP1Q9BUV0 290 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 KAAG1Q9UBP8 84 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 HILPDAQ9Y5L2 63 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 LINC00312Q9Y6C7 94 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 CRYM-AS1A6NIL9 109 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 KIAA1324LA8MWY0 1029 aaPredicted RBP9.54□□□□□ -0.88
SKA3-203ENST00000400018 SCGB1D2O95969 90 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 IGHV1-8P0DP01 117 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 BPIFB3P59826 476 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 RPS16P62249 146 aaKnown RBP9.54□□□□□ -0.88
SKA3-203ENST00000400018 BLOC1S1P78537 153 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 TMEM268Q5VZI3 342 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 CLEC2AQ6UVW9 174 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 Q6ZS49 121 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 ZDHHC22Q8N966 263 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 ABHD14AQ9BUJ0 271 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 GGACTQ9BVM4 153 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 SLC25A32Q9H2D1 315 aa9.54□□□□□ -0.88
SKA3-203ENST00000400018 METTL8Q9H825 291 aaKnown RBP9.54□□□□□ -0.88
SKA3-203ENST00000400018 C3orf85A0A1B0GTC6 90 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 SFT2D2O95562 160 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 CTSDP07339 412 aaPredicted RBP9.53□□□□□ -0.88
SKA3-203ENST00000400018 GPR12P47775 334 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 PDLIM4P50479 330 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 RUSC1-AS1Q66K80 236 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 MOB1BQ7L9L4 216 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 ABHD12Q8N2K0 398 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 SLC35G3Q8N808 338 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 TCTEX1D2Q8WW35 142 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 NAA60Q9H7X0 242 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 H7C1Q1 480 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 KRASP01116 189 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 OPN1MWP04001 364 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 IGKV1-16P04430 117 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 GIPP09681 153 aaPredicted RBP9.53□□□□□ -0.88
SKA3-203ENST00000400018 OPN1MW2P0DN77 364 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 OPN1MW3P0DN78 364 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 NQO2P16083 231 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 RAP2BP61225 183 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 BRD3OSQ6XYD6 125 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 SGPP2Q8IWX5 399 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 OR52M1Q8NGK5 317 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 Q96MF0 132 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 NEU1Q99519 415 aa9.53□□□□□ -0.88
SKA3-203ENST00000400018 UBE2J1Q9Y385 318 aaPredicted RBP9.53□□□□□ -0.88
SKA3-203ENST00000400018 CXorf65A6NEN9 183 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 FCGR3BO75015 233 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms