RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ANGPTL4Q9BY76 406 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 ZFP30Q9Y2G7 519 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 COX6A1P12074 109 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 GOLT1AQ6ZVE7 132 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 C11orf68Q9H3H3 251 aaKnown RBP11.79□□□□□ -0.52
VAPA-202ENST00000400000 ZNF256Q9Y2P7 627 aaPredicted RBP11.79□□□□□ -0.52
VAPA-202ENST00000400000 C4orf51C9J302 202 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 B4E171 279 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 TSPAN7P41732 249 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 C3orf36Q3SXR2 165 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 SPATA45Q537H7 98 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 PCSK4Q6UW60 755 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 APCDD1LQ8NCL9 501 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 M0R381 172 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 PGLYRP1O75594 196 aaPredicted RBP11.79□□□□□ -0.52
VAPA-202ENST00000400000 CRYBB3P26998 211 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 ZCCHC24Q8N2G6 241 aaKnown RBP11.79□□□□□ -0.52
VAPA-202ENST00000400000 DLL3Q9NYJ7 618 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.79□□□□□ -0.52
VAPA-202ENST00000400000 SNAI2O43623 268 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 LTBRP36941 435 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 HOGA1Q86XE5 327 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 FGFRL1Q8N441 504 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 MRPL13Q9BYD1 178 aaKnown RBP11.79□□□□□ -0.52
VAPA-202ENST00000400000 BCORQ6W2J9 1755 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 USP54Q70EL1 1684 aa11.79□□□□□ -0.52
VAPA-202ENST00000400000 M0R143 59 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 RNASE4P34096 147 aaKnown RBP11.78□□□□□ -0.52
VAPA-202ENST00000400000 GPR146Q96CH1 333 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 A0A1B0GV72 72 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 CD69Q07108 199 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 IFT22Q9H7X7 185 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 C10orf35Q96D05 121 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 ATAD5Q96QE3 1844 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 TGIF2-C20orf24A0A0A6YYL0 155 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 A0A0G2JMM0 328 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 A0A1W2PPB8 328 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 A0A1W2PRS3 328 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 KIR3DP1A8MWS1 328 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 IGKV1D-33P01593 117 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 IGKV1-33P01594 117 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 IL4P05112 153 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 LINC00596Q86U02 117 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 ATG101Q9BSB4 218 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 COL11A1P12107 1806 aaPredicted RBP11.78□□□□□ -0.52
VAPA-202ENST00000400000 ODAMA1E959 279 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 C1QAP02745 245 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 LSM10Q969L4 123 aaKnown RBP11.78□□□□□ -0.52
VAPA-202ENST00000400000 DSPPQ9NZW4 1301 aa11.78□□□□□ -0.52
VAPA-202ENST00000400000 A6NDN8 102 aa11.77□□□□□ -0.52
VAPA-202ENST00000400000 ASAH2BP0C7U1 165 aa11.77□□□□□ -0.52
VAPA-202ENST00000400000 DUX3Q96PT4 197 aa11.77□□□□□ -0.52
VAPA-202ENST00000400000 DDA1Q9BW61 102 aa11.77□□□□□ -0.52
VAPA-202ENST00000400000 RREB1Q92766 1687 aa11.77□□□□□ -0.52
VAPA-202ENST00000400000 HMSDA8MTL9 139 aa11.77□□□□□ -0.52
VAPA-202ENST00000400000 LYNX1G3V0Z9 82 aa11.77□□□□□ -0.52
VAPA-202ENST00000400000 LYNX1P0DP58 116 aa11.77□□□□□ -0.52
VAPA-202ENST00000400000 FAM27BQ5VT28 67 aa11.77□□□□□ -0.52
VAPA-202ENST00000400000 RHOVQ96L33 236 aa11.77□□□□□ -0.52
VAPA-202ENST00000400000 GEMIN7Q9H840 131 aaKnown RBP11.77□□□□□ -0.52
VAPA-202ENST00000400000 CLEC19AQ6UXS0 136 aa11.77□□□□□ -0.53
VAPA-202ENST00000400000 FBXL15Q9H469 300 aa11.77□□□□□ -0.53
VAPA-202ENST00000400000 TMEM160Q9NX00 188 aa11.77□□□□□ -0.53
VAPA-202ENST00000400000 PDCD11Q14690 1871 aaKnown RBP11.77□□□□□ -0.53
VAPA-202ENST00000400000 MIOXQ9UGB7 285 aa11.77□□□□□ -0.53
VAPA-202ENST00000400000 A0A1W2PPC1 479 aa11.77□□□□□ -0.53
VAPA-202ENST00000400000 GRIFINA4D1Z8 144 aa11.77□□□□□ -0.53
VAPA-202ENST00000400000 C9orf62Q8N4C0 152 aa11.77□□□□□ -0.53
VAPA-202ENST00000400000 KIR3DL3Q8N743 410 aa11.77□□□□□ -0.53
VAPA-202ENST00000400000 LHFPL5Q8TAF8 219 aa11.77□□□□□ -0.53
VAPA-202ENST00000400000 NPIPB3Q92617 1050 aa11.77□□□□□ -0.53
VAPA-202ENST00000400000 FOXA2Q9Y261 457 aaPredicted RBP11.77□□□□□ -0.53
VAPA-202ENST00000400000 STARD6P59095 220 aa11.77□□□□□ -0.53
VAPA-202ENST00000400000 BSPH1Q075Z2 132 aa11.77□□□□□ -0.53
VAPA-202ENST00000400000 TRGC2P03986 189 aa11.76□□□□□ -0.53
VAPA-202ENST00000400000 MUC1P15941 1255 aaPredicted RBP11.76□□□□□ -0.53
VAPA-202ENST00000400000 GALP22466 123 aa11.76□□□□□ -0.53
VAPA-202ENST00000400000 H0YL77 283 aa11.76□□□□□ -0.53
VAPA-202ENST00000400000 NPPCP23582 126 aa11.76□□□□□ -0.53
VAPA-202ENST00000400000 COL5A1-AS1Q5SY13 56 aa11.76□□□□□ -0.53
VAPA-202ENST00000400000 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.76□□□□□ -0.53
VAPA-202ENST00000400000 PARLQ9H300 379 aa11.76□□□□□ -0.53
VAPA-202ENST00000400000 PNRC1Q12796 327 aaPredicted RBP11.76□□□□□ -0.53
VAPA-202ENST00000400000 ZP4Q12836 540 aa11.76□□□□□ -0.53
VAPA-202ENST00000400000 BIVMQ86UB2 503 aa11.76□□□□□ -0.53
VAPA-202ENST00000400000 EEF1AKMT3Q96AZ1 226 aa11.76□□□□□ -0.53
VAPA-202ENST00000400000 MTCL1Q9Y4B5 1905 aaKnown RBP11.76□□□□□ -0.53
VAPA-202ENST00000400000 LINC00299Q6ZSB3 139 aa11.76□□□□□ -0.53
VAPA-202ENST00000400000 FAM159AQ6UWV7 190 aa11.76□□□□□ -0.53
VAPA-202ENST00000400000 SELENOHQ8IZQ5 122 aaKnown RBP11.76□□□□□ -0.53
VAPA-202ENST00000400000 LHFPL6Q9Y693 200 aa11.76□□□□□ -0.53
VAPA-202ENST00000400000 RRHO14718 337 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 CTDSPLO15194 276 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 APC2O95996 2303 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 PLA2G10O15496 165 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 SAA1P0DJI8 122 aaPredicted RBP11.75□□□□□ -0.53
VAPA-202ENST00000400000 CXCL2P19875 107 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 DEFB121Q5J5C9 76 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 FAM168AQ92567 244 aa11.75□□□□□ -0.53
VAPA-202ENST00000400000 RAMP1O60894 148 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms