RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CEBPDP49716 269 aaPredicted RBP11.73□□□□□ -0.53
APOB-202ENST00000399256 LINC00310P59036 64 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 VN1R17PQ8TDU5 208 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 POM121L2Q96KW2 1035 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 PILRBQ9UKJ0 227 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 YPEL1O60688 119 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 SERF1AO75920 110 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 TNFSF10P50591 281 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 LINC00205P59089 165 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 TPPP2P59282 170 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 TPTE2P1Q5T6R2 138 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 TMEM45BQ96B21 275 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 YPEL2Q96QA6 119 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 MIEN1Q9BRT3 115 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 TNFSF13O75888 250 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 UBE2NP61088 152 aaKnown RBP11.72□□□□□ -0.53
APOB-202ENST00000399256 NRN1LQ496H8 165 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 ARSJQ5FYB0 599 aaPredicted RBP11.72□□□□□ -0.53
APOB-202ENST00000399256 LPAR2Q9HBW0 351 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 KCNIP2Q9NS61 270 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 PPP1R14DQ9NXH3 145 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 MPC1Q9Y5U8 109 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 PI4KAP42356 2102 aa11.72□□□□□ -0.53
APOB-202ENST00000399256 A0A1W2PPV4 95 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 F2Z2F3 143 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 J3QT63 122 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 P0C879 139 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 ZNF645Q8N7E2 425 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 OR52L2PQ8NGH6 319 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 OR2Y1Q8NGV0 311 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 BTF3L4Q96K17 158 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 MSL2Q9HCI7 577 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 MED12LQ86YW9 2145 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 SCO2A0A1W2PP80 73 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 OTX2P32243 289 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 BRS3P32247 399 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 TEX43Q6ZNM6 134 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 WDR86Q86TI4 376 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 VASH2Q86V25 355 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 Q8N7P7 452 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 DUSP23Q9BVJ7 150 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 PKIBQ9C010 78 aa11.71□□□□□ -0.53
APOB-202ENST00000399256 DMDP11532 3685 aa11.71□□□□□ -0.54
APOB-202ENST00000399256 SLC17A3O00476 420 aa11.71□□□□□ -0.54
APOB-202ENST00000399256 RAC2P15153 192 aa11.71□□□□□ -0.54
APOB-202ENST00000399256 FOLR3P41439 243 aa11.71□□□□□ -0.54
APOB-202ENST00000399256 LHX2P50458 406 aa11.71□□□□□ -0.54
APOB-202ENST00000399256 GFRA1P56159 465 aa11.71□□□□□ -0.54
APOB-202ENST00000399256 BRWD1-AS2P59051 145 aa11.71□□□□□ -0.54
APOB-202ENST00000399256 ZNF90Q03938 601 aa11.71□□□□□ -0.54
APOB-202ENST00000399256 Q0VFX4 171 aa11.71□□□□□ -0.54
APOB-202ENST00000399256 C20orf144Q9BQM9 153 aa11.71□□□□□ -0.54
APOB-202ENST00000399256 VAMP8Q9BV40 100 aa11.71□□□□□ -0.54
APOB-202ENST00000399256 CRISP2P16562 243 aa11.7□□□□□ -0.54
APOB-202ENST00000399256 TFPI2P48307 235 aa11.7□□□□□ -0.54
APOB-202ENST00000399256 YPEL3P61236 119 aaPredicted RBP11.7□□□□□ -0.54
APOB-202ENST00000399256 PLP2Q04941 152 aa11.7□□□□□ -0.54
APOB-202ENST00000399256 TMEM183BQ1AE95 376 aa11.7□□□□□ -0.54
APOB-202ENST00000399256 VWC2Q2TAL6 325 aa11.7□□□□□ -0.54
APOB-202ENST00000399256 H2BFWTQ7Z2G1 175 aa11.7□□□□□ -0.54
APOB-202ENST00000399256 OR10G8Q8NGN5 311 aa11.7□□□□□ -0.54
APOB-202ENST00000399256 OR2J1Q9GZK6 312 aa11.7□□□□□ -0.54
APOB-202ENST00000399256 MRPL18Q9H0U6 180 aaKnown RBP11.7□□□□□ -0.54
APOB-202ENST00000399256 VPS13AQ96RL7 3174 aa11.7□□□□□ -0.54
APOB-202ENST00000399256 SERPINA7P05543 415 aa11.7□□□□□ -0.54
APOB-202ENST00000399256 CELA3AP09093 270 aa11.7□□□□□ -0.54
APOB-202ENST00000399256 ARL14EPLP0DKL9 152 aa11.7□□□□□ -0.54
APOB-202ENST00000399256 IL11RAQ14626 422 aa11.7□□□□□ -0.54
APOB-202ENST00000399256 OCC1Q8TAD7 63 aa11.7□□□□□ -0.54
APOB-202ENST00000399256 USF3Q68DE3 2245 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 NXPH2O95156 264 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 FRMD6-AS1P0C7T7 363 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 TIMP3P35625 211 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 HOXA4Q00056 320 aaPredicted RBP11.69□□□□□ -0.54
APOB-202ENST00000399256 HLA-DRB5Q30154 266 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 PEAR1Q5VY43 1037 aaPredicted RBP11.69□□□□□ -0.54
APOB-202ENST00000399256 BAGE3Q86Y29 109 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 BAGE2Q86Y30 109 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 SCCPDHQ8NBX0 429 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 LINC00470Q9BZP3 86 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 MBNL3Q9NUK0 354 aaKnown RBP11.69□□□□□ -0.54
APOB-202ENST00000399256 C15orf62A8K5M9 175 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 CDIPTO14735 213 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 MT-CO3P00414 261 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 COL8A2P25067 703 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 CD1BP29016 333 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 PAFAH1B2P68402 229 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 IFI44Q8TCB0 444 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 DOCK7Q96N67 2140 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 CIB3Q96Q77 187 aaPredicted RBP11.69□□□□□ -0.54
APOB-202ENST00000399256 FAM103A1Q9BTL3 118 aaKnown RBP11.69□□□□□ -0.54
APOB-202ENST00000399256 SAMD10Q9BYL1 202 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 MRPS18CQ9Y3D5 142 aaKnown RBP11.69□□□□□ -0.54
APOB-202ENST00000399256 SELENOTP62341 195 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 GAGE1Q13065 139 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 OR5I1Q13606 314 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 OR5AU1Q8NGC0 362 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 QTRT1Q9BXR0 403 aaKnown RBP11.69□□□□□ -0.54
APOB-202ENST00000399256 KCNIP1Q9NZI2 227 aa11.69□□□□□ -0.54
APOB-202ENST00000399256 WIPI2Q9Y4P8 454 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms