RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 FCN2Q15485 313 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 BCDIN3DQ7Z5W3 292 aaKnown RBP2.36□□□□□ -2.03
CHD9-202ENST00000398510 OR51G1Q8NGK1 321 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 CLDND2Q8NHS1 167 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 LINC01599Q8WXQ3 324 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 TMEM54Q969K7 222 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 SCARF2Q96GP6 870 aaPredicted RBP2.36□□□□□ -2.03
CHD9-202ENST00000398510 TP53RKQ96S44 253 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 RSG1Q9BU20 258 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 BANF2Q9H503 90 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 BET1LQ9NYM9 111 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 TAS2R4Q9NYW5 299 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 SPG11Q96JI7 2443 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 COL4A3Q01955 1670 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 KRBA1A5PL33 1030 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 PIAS1O75925 651 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 PDE6HQ13956 83 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 RPUSD3Q6P087 351 aaKnown RBP2.36□□□□□ -2.03
CHD9-202ENST00000398510 SLC35E3Q7Z769 313 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 OR10AC1Q8NH08 325 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 TAF15Q92804 592 aaKnown RBP eCLIP2.36□□□□□ -2.03
CHD9-202ENST00000398510 C2orf50Q96LR7 162 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 AJAP1Q9UKB5 411 aaPredicted RBP2.36□□□□□ -2.03
CHD9-202ENST00000398510 B9D1Q9UPM9 204 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 MAP1LC3B2A6NCE7 125 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 G3V3Y1 287 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 LMX1BO60663 402 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 INSP01308 110 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 C1QAP02745 245 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 PPBPP02775 128 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 TMEM251Q8N6I4 163 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 OR52B4Q8NGK2 314 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 C8orf46Q8TAG6 207 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 WBP1Q96G27 269 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 VPS25Q9BRG1 176 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 MAP1LC3BQ9GZQ8 125 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 CACNG4Q9UBN1 327 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 PSG11Q9UQ72 335 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 TCRBV7S3A2A0A539 114 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 TMEM235A6NFC5 223 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 C9JVG2 144 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 NPIPB11E5RHQ5 1161 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 HYPMO75409 117 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 MOSP00540 346 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 CD40P25942 277 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 TIMP3P35625 211 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 MPV17P39210 176 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 CACNG7P62955 275 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 SLC9A3R2Q15599 337 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 TMEM241Q24JQ0 296 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 OR5C1Q8NGR4 320 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 KIR2DL5BQ8NHK3 375 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 DPH3Q96FX2 82 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 BEX4Q9NWD9 120 aaPredicted RBP2.36□□□□□ -2.03
CHD9-202ENST00000398510 TRAPPC1Q9Y5R8 145 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 FABP2P12104 132 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 ZNF32P17041 273 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 EFNB2P52799 333 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 ADIPOQQ15848 244 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 GUCA2BQ16661 112 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 STHQ8IWL8 128 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 SELENOHQ8IZQ5 122 aaKnown RBP2.36□□□□□ -2.03
CHD9-202ENST00000398510 DOK4Q8TEW6 326 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 OR8B4Q96RC9 309 aa2.36□□□□□ -2.03
CHD9-202ENST00000398510 FCN1O00602 326 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 ANKRD17O75179 2603 aaKnown RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 PMCHL1Q16048 86 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 C1orf220Q5T0J3 134 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 SFRP4Q6FHJ7 346 aaPredicted RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 SLC35E4Q6ICL7 350 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 KIR3DL3Q8N743 410 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 WIPI2Q9Y4P8 454 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 CLDN34H7C241 214 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 NKX2-8O15522 239 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 PSCAO43653 123 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 ATP5LO75964 103 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 PSMB2P49721 201 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 RPL15P61313 204 aaKnown RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 FGF12P61328 243 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 TMEM236Q5W0B7 351 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 Q6ZS52 159 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 BAP18Q8IXM2 172 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 MEGF10Q96KG7 1140 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 ST6GALNAC2Q9UJ37 374 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 TRAV39A0A0B4J263 110 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 ZC3H12DA2A288 527 aaKnown RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 FGF8P55075 233 aaPredicted RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 ZNF738Q8NE65 137 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 ZNF430Q9H8G1 570 aaPredicted RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 KCNE5Q9UJ90 142 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 TNFRSF18Q9Y5U5 241 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 PPIAL4CA0A0B4J2A2 164 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 TMEM189A5PLL7 270 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 C15orf61A6NNL5 157 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 CEACAM18A8MTB9 384 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 ADRA2AP08913 450 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 PPIAL4GP0DN37 164 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 CEBPDP49716 269 aaPredicted RBP2.35□□□□□ -2.03
CHD9-202ENST00000398510 PRSS12P56730 875 aa2.35□□□□□ -2.03
CHD9-202ENST00000398510 CLDN20P56880 219 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms