RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 DEFA6Q01524 100 aa9.99□□□□□ -0.81
VPREB3-202ENST00000398465 EIF4EBP1Q13541 118 aaPredicted RBP9.99□□□□□ -0.81
VPREB3-202ENST00000398465 ECSCRQ19T08 205 aa9.99□□□□□ -0.81
VPREB3-202ENST00000398465 BEAN1Q3B7T3 259 aa9.99□□□□□ -0.81
VPREB3-202ENST00000398465 ZNF66Q6ZN08 573 aa9.99□□□□□ -0.81
VPREB3-202ENST00000398465 C8orf86Q6ZUL3 223 aa9.99□□□□□ -0.81
VPREB3-202ENST00000398465 LINC00482Q8N8I6 264 aa9.99□□□□□ -0.81
VPREB3-202ENST00000398465 ZBTB34Q8NCN2 500 aa9.99□□□□□ -0.81
VPREB3-202ENST00000398465 C4orf3Q8WVX3 66 aa9.99□□□□□ -0.81
VPREB3-202ENST00000398465 BORCS5Q969J3 196 aa9.99□□□□□ -0.81
VPREB3-202ENST00000398465 RCC1LQ96I51 464 aaKnown RBP9.99□□□□□ -0.81
VPREB3-202ENST00000398465 TPSG1Q9NRR2 321 aa9.99□□□□□ -0.81
VPREB3-202ENST00000398465 FOXA2Q9Y261 457 aaPredicted RBP9.99□□□□□ -0.81
VPREB3-202ENST00000398465 FBXO7Q9Y3I1 522 aa9.99□□□□□ -0.81
VPREB3-202ENST00000398465 NOTCH3Q9UM47 2321 aa9.99□□□□□ -0.81
VPREB3-202ENST00000398465 G3V318 75 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 G3V4G9 280 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 HPGDSO60760 199 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 TPPPO94811 219 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 CRYZL1O95825 349 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 CRYGBP07316 175 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 ELK1P19419 428 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 AADACP22760 399 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 MYCNOSP40205 109 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 TMBIM6P55061 237 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 UBE2KP61086 200 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 TMEM267Q0VDI3 215 aaPredicted RBP9.98□□□□□ -0.81
VPREB3-202ENST00000398465 VMA21Q3ZAQ7 101 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 AKIRIN2Q53H80 203 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 OR5M8Q8NGP6 311 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 OR4S2Q8NH73 311 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 GPX8Q8TED1 209 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 ABHD5Q8WTS1 349 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 GIMAP1Q8WWP7 306 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 UBE2E2Q96LR5 201 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 P2RX4Q99571 388 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 GPR61Q9BZJ8 451 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 EHFQ9NZC4 300 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 WSB1Q9Y6I7 421 aa9.98□□□□□ -0.81
VPREB3-202ENST00000398465 PRKDCP78527 4128 aaKnown RBP9.98□□□□□ -0.81
VPREB3-202ENST00000398465 DNAH3Q8TD57 4116 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 TNCP24821 2201 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 A0A1W2PN81 502 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 MEIS3P1A6NDR6 274 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 J3QRK9 145 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 SULT1C2O00338 296 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 FCN1O00602 326 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 NOL3O60936 208 aaKnown RBP9.97□□□□□ -0.81
VPREB3-202ENST00000398465 RCVRNP35243 200 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 CHRNA7P36544 502 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 KIR2DS2P43631 304 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 RPL5P46777 297 aaKnown RBP9.97□□□□□ -0.81
VPREB3-202ENST00000398465 HERV-K104P61576 105 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 SSBP2P81877 361 aaPredicted RBP9.97□□□□□ -0.81
VPREB3-202ENST00000398465 DYRK1AQ13627 763 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 TMEM65Q6PI78 240 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 CLVS1Q8IUQ0 354 aaPredicted RBP9.97□□□□□ -0.81
VPREB3-202ENST00000398465 MRPL41Q8IXM3 137 aaKnown RBP9.97□□□□□ -0.81
VPREB3-202ENST00000398465 TEX45Q8NA69 505 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 OR5H2Q8NGV7 314 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 SECTM1Q8WVN6 248 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 TCTEX1D2Q8WW35 142 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 CCDC59Q9P031 241 aaKnown RBP9.97□□□□□ -0.81
VPREB3-202ENST00000398465 NUBP2Q9Y5Y2 271 aa9.97□□□□□ -0.81
VPREB3-202ENST00000398465 H3BUA1 57 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 SOX15O60248 233 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 FCGR3BO75015 233 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 EGR2P11161 476 aaPredicted RBP9.96□□□□□ -0.82
VPREB3-202ENST00000398465 RPL30P62888 115 aaKnown RBP9.96□□□□□ -0.82
VPREB3-202ENST00000398465 RUNX1Q01196 453 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 CATR1Q13166 79 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 FHL3Q13643 280 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 FXYD3Q14802 87 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 ACTBL2Q562R1 376 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 LCNL1Q6ZST4 164 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 C18orf65Q6ZTR6 163 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 C1QL4Q86Z23 238 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 GRPEL2Q8TAA5 225 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 VSTM2AQ8TAG5 236 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 C15orf40Q8WUR7 153 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 MOB3AQ96BX8 217 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 TMEM68Q96MH6 324 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 CLCC1Q96S66 551 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 MCRIP2Q9BUT9 160 aaKnown RBP9.96□□□□□ -0.82
VPREB3-202ENST00000398465 SLC5A7Q9GZV3 580 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 SLA2Q9H6Q3 261 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 TAS2R8Q9NYW2 309 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 VSIG4Q9Y279 399 aa9.96□□□□□ -0.82
VPREB3-202ENST00000398465 SRRM4A7MD48 611 aaKnown RBP9.95□□□□□ -0.82
VPREB3-202ENST00000398465 FAM25AB3EWG3 89 aa9.95□□□□□ -0.82
VPREB3-202ENST00000398465 FAM25CB3EWG5 89 aa9.95□□□□□ -0.82
VPREB3-202ENST00000398465 FAM25GB3EWG6 89 aa9.95□□□□□ -0.82
VPREB3-202ENST00000398465 CCL24O00175 119 aa9.95□□□□□ -0.82
VPREB3-202ENST00000398465 ARPC1BO15143 372 aaKnown RBP9.95□□□□□ -0.82
VPREB3-202ENST00000398465 RBFOX2O43251 390 aaKnown RBP eCLIP9.95□□□□□ -0.82
VPREB3-202ENST00000398465 FCER2P06734 321 aa9.95□□□□□ -0.82
VPREB3-202ENST00000398465 SAA1P0DJI8 122 aaPredicted RBP9.95□□□□□ -0.82
VPREB3-202ENST00000398465 CD40LGP29965 261 aa9.95□□□□□ -0.82
VPREB3-202ENST00000398465 RAB9AP51151 201 aa9.95□□□□□ -0.82
VPREB3-202ENST00000398465 FXYD4P59646 89 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms