RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 CSN3P07498 182 aa13.96□□□□□ -0.17
CTDSP2-201ENST00000398073 OR8I2Q8N0Y5 310 aa13.96□□□□□ -0.17
CTDSP2-201ENST00000398073 DEFB124Q8NES8 71 aa13.96□□□□□ -0.17
CTDSP2-201ENST00000398073 AKIRIN1Q9H9L7 192 aaPredicted RBP13.96□□□□□ -0.17
CTDSP2-201ENST00000398073 GVINP1Q7Z2Y8 2422 aa13.96□□□□□ -0.17
CTDSP2-201ENST00000398073 K7N7A8 449 aa13.96□□□□□ -0.17
CTDSP2-201ENST00000398073 COX7A1P24310 79 aa13.96□□□□□ -0.17
CTDSP2-201ENST00000398073 HSPE1P61604 102 aaKnown RBP13.96□□□□□ -0.17
CTDSP2-201ENST00000398073 IMMP1LQ96LU5 166 aa13.96□□□□□ -0.17
CTDSP2-201ENST00000398073 TMEM140Q9NV12 185 aa13.96□□□□□ -0.17
CTDSP2-201ENST00000398073 IGKV1D-8A0A087WSZ0 117 aa13.96□□□□□ -0.18
CTDSP2-201ENST00000398073 LINC00587B1AMM8 73 aa13.96□□□□□ -0.18
CTDSP2-201ENST00000398073 ARL14EPLP0DKL9 152 aa13.96□□□□□ -0.18
CTDSP2-201ENST00000398073 CD99P14209 185 aa13.96□□□□□ -0.18
CTDSP2-201ENST00000398073 IBA57Q5T440 356 aaKnown RBP13.96□□□□□ -0.18
CTDSP2-201ENST00000398073 OR4B1Q8NGF8 309 aa13.96□□□□□ -0.18
CTDSP2-201ENST00000398073 ONECUT1Q9UBC0 465 aa13.96□□□□□ -0.18
CTDSP2-201ENST00000398073 ZNF729A6NN14 1252 aaPredicted RBP13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 CDCP2Q5VXM1 449 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 MRPL14Q6P1L8 145 aaKnown RBP13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 KLF14Q8TD94 323 aaPredicted RBP13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 Q8WTZ3 238 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 MRPL18Q9H0U6 180 aaKnown RBP13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 JPT1Q9UK76 154 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 NCBP2LA6PVI3 153 aaKnown RBP13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 CD82P27701 267 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 RPL31P62899 125 aaKnown RBP13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 LCN2P80188 198 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 RIGQ13278 110 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 CA5BP1Q8WTZ4 195 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 RND1Q92730 232 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 MAP1LC3CQ9BXW4 147 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 WNT5AP41221 380 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 MDC1Q14676 2089 aaKnown RBP13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 SELENOTP62341 195 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 SLC35B1P78383 322 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 SLC35E4Q6ICL7 350 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 GTF2H5Q6ZYL4 71 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 SPSB4Q96A44 273 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 KLHDC3Q9BQ90 382 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 HES7Q9BYE0 225 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 TCF19Q9Y242 345 aa13.95□□□□□ -0.18
CTDSP2-201ENST00000398073 UBE2CO00762 179 aa13.94□□□□□ -0.18
CTDSP2-201ENST00000398073 CEACAM3P40198 252 aa13.94□□□□□ -0.18
CTDSP2-201ENST00000398073 SDF2L1Q9HCN8 221 aa13.94□□□□□ -0.18
CTDSP2-201ENST00000398073 COLCA2A8K830 154 aa13.94□□□□□ -0.18
CTDSP2-201ENST00000398073 FOLR2P14207 255 aa13.94□□□□□ -0.18
CTDSP2-201ENST00000398073 FAM87AP0C7U9 286 aa13.94□□□□□ -0.18
CTDSP2-201ENST00000398073 ACP1P24666 158 aa13.94□□□□□ -0.18
CTDSP2-201ENST00000398073 SFXN3Q9BWM7 321 aa13.94□□□□□ -0.18
CTDSP2-201ENST00000398073 CALYQ9NYX4 217 aa13.94□□□□□ -0.18
CTDSP2-201ENST00000398073 ZNF525Q8N782 197 aa13.94□□□□□ -0.18
CTDSP2-201ENST00000398073 TCF20Q9UGU0 1960 aaKnown RBP13.94□□□□□ -0.18
CTDSP2-201ENST00000398073 CFPP27918 469 aa13.93□□□□□ -0.18
CTDSP2-201ENST00000398073 ID3Q02535 119 aa13.93□□□□□ -0.18
CTDSP2-201ENST00000398073 ICAM4Q14773 271 aa13.93□□□□□ -0.18
CTDSP2-201ENST00000398073 SFRP2Q96HF1 295 aa13.93□□□□□ -0.18
CTDSP2-201ENST00000398073 A8MWL6 223 aa13.93□□□□□ -0.18
CTDSP2-201ENST00000398073 LINC00869P0C866 280 aa13.93□□□□□ -0.18
CTDSP2-201ENST00000398073 LTBRP36941 435 aa13.93□□□□□ -0.18
CTDSP2-201ENST00000398073 CDX2Q99626 313 aaPredicted RBP13.93□□□□□ -0.18
CTDSP2-201ENST00000398073 C11orf42Q8N5U0 333 aa13.93□□□□□ -0.18
CTDSP2-201ENST00000398073 RASL11BQ9BPW5 248 aa13.93□□□□□ -0.18
CTDSP2-201ENST00000398073 NPCDR1Q9BY65 106 aa13.93□□□□□ -0.18
CTDSP2-201ENST00000398073 PRR33A8MZF0 331 aa13.92□□□□□ -0.18
CTDSP2-201ENST00000398073 CLPSP04118 112 aa13.92□□□□□ -0.18
CTDSP2-201ENST00000398073 ASCL5Q7RTU5 278 aa13.92□□□□□ -0.18
CTDSP2-201ENST00000398073 ASCL3Q9NQ33 180 aa13.92□□□□□ -0.18
CTDSP2-201ENST00000398073 CEACAM18A8MTB9 384 aa13.92□□□□□ -0.18
CTDSP2-201ENST00000398073 OR4D5Q8NGN0 318 aa13.92□□□□□ -0.18
CTDSP2-201ENST00000398073 GTF3AQ92664 365 aaKnown RBP13.92□□□□□ -0.18
CTDSP2-201ENST00000398073 SLC25A10Q9UBX3 287 aaPredicted RBP13.92□□□□□ -0.18
CTDSP2-201ENST00000398073 HSPB8Q9UJY1 196 aa13.92□□□□□ -0.18
CTDSP2-201ENST00000398073 INSIG2Q9Y5U4 225 aa13.92□□□□□ -0.18
CTDSP2-201ENST00000398073 BMPR1BO00238 502 aa13.92□□□□□ -0.18
CTDSP2-201ENST00000398073 EFNA2O43921 213 aa13.92□□□□□ -0.18
CTDSP2-201ENST00000398073 ZNF703Q9H7S9 590 aaPredicted RBP13.92□□□□□ -0.18
CTDSP2-201ENST00000398073 LOC102723996A0A087X1L8 192 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 IGKV1D-13A0A0B4J2D9 117 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 C12orf77C9JDV5 145 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 PROB1E7EW31 1015 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 IGKV1-13P0DP09 117 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 S100A4P26447 101 aaKnown RBP13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 ABHD12Q8N2K0 398 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 ELOVL1Q9BW60 279 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 WFDC1Q9HC57 220 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 RHBDL1O75783 438 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 EGR1P18146 543 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 PLAURQ03405 335 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 STPG1Q5TH74 334 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 FAM131CQ96AQ9 280 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 CCL13Q99616 98 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 GP6Q9HCN6 339 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 GOLT1BQ9Y3E0 138 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 SCN8AQ9UQD0 1980 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 TRBV9A0A0B4J1U6 114 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 ITLN1Q8WWA0 313 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 GNG7O60262 68 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 HYPMO75409 117 aa13.91□□□□□ -0.18
CTDSP2-201ENST00000398073 C8orf88P0DMB2 117 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms