RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 RAG2P55895 527 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 UBE2V2Q15819 145 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 TMEM222Q9H0R3 208 aa9.69□□□□□ -0.86
TTC28-201ENST00000397906 ATP6V0CP27449 155 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 RELBQ01201 579 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 CLLU1Q5K131 121 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 A0A0B4J293 547 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 NPIPB11E5RHQ5 1161 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 PGA5P0DJD9 388 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 SULT1A2P50226 295 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 SNRPEP62304 92 aaKnown RBP9.68□□□□□ -0.86
TTC28-201ENST00000397906 SCMH1Q96GD3 660 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 PRSS8Q16651 343 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 MMP9P14780 707 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 FAM216BQ8N7L0 139 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 C9orf106Q8NAJ2 232 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 CTXND1A0A1B0GTU2 59 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 LYNX1G3V0Z9 82 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 LYNX1P0DP58 116 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 C8orf82Q6P1X6 216 aaPredicted RBP9.68□□□□□ -0.86
TTC28-201ENST00000397906 ZNF818PQ6ZRF7 136 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 PKIBQ9C010 78 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 PGPA6NDG6 321 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 IL4P05112 153 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 MOB4Q9Y3A3 225 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 ANKRD36A6QL64 1941 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 CKAP5Q14008 2032 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 ZNF236Q9UL36 1845 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 SCN5AQ14524 2016 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 SMIM10L1P0DMW3 83 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 HOXB1P14653 301 aaPredicted RBP9.68□□□□□ -0.86
TTC28-201ENST00000397906 ANOS1P23352 680 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 SMIM10Q96HG1 83 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 NEURL2Q9BR09 285 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 UMODP07911 640 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 AMY1AP04745 511 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 CD69Q07108 199 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 CEBPEQ15744 281 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 VWCEQ96DN2 955 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 NEU1Q99519 415 aa9.68□□□□□ -0.86
TTC28-201ENST00000397906 FOXI3A8MTJ6 420 aaPredicted RBP9.67□□□□□ -0.86
TTC28-201ENST00000397906 NMUP48645 174 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 PHYHIPLQ96FC7 376 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 IGKV1D-42A0A075B6H8 117 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 EGR4Q05215 589 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 KLK15Q9H2R5 256 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 ZNF430Q9H8G1 570 aaPredicted RBP9.67□□□□□ -0.86
TTC28-201ENST00000397906 IL19Q9UHD0 177 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 CHD5Q8TDI0 1954 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 PGLYRP4Q96LB8 373 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 CD24P25063 80 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 SMAGPQ0VAQ4 97 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 FBXL15Q9H469 300 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 OR5AC2Q9NZP5 309 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 SCN10AQ9Y5Y9 1956 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 TMEM186Q96B77 213 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 HMSDA8MTL9 139 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 KLF4O43474 513 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 ABLIM2Q6H8Q1 611 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 SLC25A33Q9BSK2 321 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 C9JCJ5 164 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 NPIPB6E9PJ23 425 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 PSG9Q00887 426 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 CTHRC1Q96CG8 243 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 H3BQ15 152 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 PTGDSP41222 190 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 DLX6P56179 175 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 C2orf83Q53S99 150 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 TCTEX1D1Q8N7M0 179 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 OPN4Q9UHM6 478 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 NPIPB8E9PQR5 432 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 RIPPLY2Q5TAB7 128 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 ZNF418Q8TF45 676 aaPredicted RBP9.67□□□□□ -0.86
TTC28-201ENST00000397906 ZNF107Q9UII5 783 aaPredicted RBP9.67□□□□□ -0.86
TTC28-201ENST00000397906 ZNF729A6NN14 1252 aaPredicted RBP9.67□□□□□ -0.86
TTC28-201ENST00000397906 NDUFB4O95168 129 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 ZNF708P17019 499 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 MFAP2P55001 183 aa9.67□□□□□ -0.86
TTC28-201ENST00000397906 GLRXP35754 106 aa9.66□□□□□ -0.86
TTC28-201ENST00000397906 WDR25Q64LD2 544 aaPredicted RBP9.66□□□□□ -0.86
TTC28-201ENST00000397906 NEU4Q8WWR8 484 aaPredicted RBP9.66□□□□□ -0.86
TTC28-201ENST00000397906 CD300CQ08708 224 aa9.66□□□□□ -0.86
TTC28-201ENST00000397906 JPT1Q9UK76 154 aa9.66□□□□□ -0.86
TTC28-201ENST00000397906 ACP7Q6ZNF0 438 aa9.66□□□□□ -0.86
TTC28-201ENST00000397906 COLCA1Q6ZS62 124 aa9.66□□□□□ -0.86
TTC28-201ENST00000397906 G6PC2Q9NQR9 355 aa9.66□□□□□ -0.86
TTC28-201ENST00000397906 VDAC2P45880 294 aaPredicted RBP9.66□□□□□ -0.86
TTC28-201ENST00000397906 LSM10Q969L4 123 aaKnown RBP9.66□□□□□ -0.86
TTC28-201ENST00000397906 PNRC1Q12796 327 aaPredicted RBP9.66□□□□□ -0.86
TTC28-201ENST00000397906 NCMAPQ5T1S8 102 aa9.66□□□□□ -0.86
TTC28-201ENST00000397906 CLEC19AQ6UXS0 136 aa9.66□□□□□ -0.86
TTC28-201ENST00000397906 SELENOKQ9Y6D0 94 aa9.66□□□□□ -0.86
TTC28-201ENST00000397906 FSTP19883 344 aa9.66□□□□□ -0.86
TTC28-201ENST00000397906 CKS2P33552 79 aa9.66□□□□□ -0.86
TTC28-201ENST00000397906 FAM159AQ6UWV7 190 aa9.66□□□□□ -0.86
TTC28-201ENST00000397906 GP6Q9HCN6 339 aa9.66□□□□□ -0.86
TTC28-201ENST00000397906 GNLYP22749 145 aa9.66□□□□□ -0.86
TTC28-201ENST00000397906 PSMB11A5LHX3 300 aa9.66□□□□□ -0.86
TTC28-201ENST00000397906 TGFBR3LH3BV60 316 aa9.65□□□□□ -0.86
TTC28-201ENST00000397906 TFF1P04155 84 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms