RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 FAM90A27PA6NNH2 459 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 PPIHO43447 177 aaKnown RBP9.2□□□□□ -0.94
CCDC40-204ENST00000397545 S1PR2O95136 353 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 FXYD3Q14802 87 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 NHLRC2Q8NBF2 726 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 CCL13Q99616 98 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 PARLQ9H300 379 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 BHLHA15Q7RTS1 189 aaPredicted RBP9.2□□□□□ -0.94
CCDC40-204ENST00000397545 TGIF2LYQ8IUE0 185 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 PAQR4Q8N4S7 273 aaPredicted RBP9.2□□□□□ -0.94
CCDC40-204ENST00000397545 ZBTB34Q8NCN2 500 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 RCC1LQ96I51 464 aaKnown RBP9.2□□□□□ -0.94
CCDC40-204ENST00000397545 CBLN4Q9NTU7 201 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 CARHSP1Q9Y2V2 147 aaKnown RBP9.2□□□□□ -0.94
CCDC40-204ENST00000397545 YTHDF2Q9Y5A9 579 aaKnown RBP9.2□□□□□ -0.94
CCDC40-204ENST00000397545 CLDN16Q9Y5I7 305 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 PCDH15Q96QU1 1955 aa9.2□□□□□ -0.94
CCDC40-204ENST00000397545 IGKV3D-11A0A0A0MRZ8 115 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 IGKV1-9A0A0C4DH69 117 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 A0A1B0GV90 55 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 CRYABP02511 175 aaKnown RBP9.19□□□□□ -0.94
CCDC40-204ENST00000397545 GLIPR1P48060 266 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 RTP5Q14D33 572 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 PCOLCEQ15113 449 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 TMEM140Q9NV12 185 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 RNF7Q9UBF6 113 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 WIPI2Q9Y4P8 454 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 IGKV1D-8A0A087WSZ0 117 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 P01737 135 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 IGFBP3P17936 291 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-204ENST00000397545 RPL31P62899 125 aaKnown RBP9.19□□□□□ -0.94
CCDC40-204ENST00000397545 SAP30LQ9HAJ7 183 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 IGKV3-7A0A075B6H7 116 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 TCF21O43680 179 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 ZNF735P0CB33 412 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 TNFRSF9Q07011 255 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 DRAM1Q8N682 238 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 GSN-AS1Q9NRJ2 163 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 J3KRW8 73 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 AGAP20933 346 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 MPV17P39210 176 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 KIR2DS2P43631 304 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 FHL1Q13642 323 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 ATP1A1-AS1Q5TC04 95 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 VWA1Q6PCB0 445 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 FAM222BQ8WU58 562 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 ZNF524Q96C55 264 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 IL19Q9UHD0 177 aa9.19□□□□□ -0.94
CCDC40-204ENST00000397545 K7ESF4 209 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 WNT9BO14905 357 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 GFRA3O60609 400 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 RHBDL1O75783 438 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 PRSS1P07477 247 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 CELA3AP09093 270 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 SSTR5P35346 364 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 RIPPLY2Q5TAB7 128 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 PMS2CLQ68D20 193 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 CYB5R2Q6BCY4 276 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 HCP5Q6MZN7 132 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 INO80CQ6PI98 192 aaPredicted RBP9.18□□□□□ -0.94
CCDC40-204ENST00000397545 NAGKQ9UJ70 344 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 PRNDQ9UKY0 176 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 H3BTX0 84 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 C10orf113Q5VZT2 155 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 TMEM105Q8N8V8 129 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 VSTM2AQ8TAG5 236 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 OR51B2Q9Y5P1 312 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 TEX50A0A1B0GTY4 177 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 MARCH11A6NNE9 402 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 IGLV3-19P01714 112 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 IGHMP01871 453 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 APCSP02743 223 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 COX6A1P12074 109 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 OTX1P32242 354 aaPredicted RBP9.18□□□□□ -0.94
CCDC40-204ENST00000397545 RTN4RL2Q86UN3 420 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 ATOH7Q8N100 152 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 MUC15Q8N387 334 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 C5orf17Q8NAS9 161 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 OR1L8Q8NGR8 309 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 SAP25Q8TEE9 199 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 OR2V2Q96R30 315 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 METTL1Q9UBP6 276 aaKnown RBP9.18□□□□□ -0.94
CCDC40-204ENST00000397545 DOCK11Q5JSL3 2073 aa9.18□□□□□ -0.94
CCDC40-204ENST00000397545 HPRT1P00492 218 aa9.17□□□□□ -0.94
CCDC40-204ENST00000397545 SP9P0CG40 484 aa9.17□□□□□ -0.94
CCDC40-204ENST00000397545 BRS3P32247 399 aa9.17□□□□□ -0.94
CCDC40-204ENST00000397545 RPL24P83731 157 aaKnown RBP9.17□□□□□ -0.94
CCDC40-204ENST00000397545 PQLC2Q6ZP29 291 aa9.17□□□□□ -0.94
CCDC40-204ENST00000397545 RNF144BQ7Z419 303 aa9.17□□□□□ -0.94
CCDC40-204ENST00000397545 WDFY1Q8IWB7 410 aa9.17□□□□□ -0.94
CCDC40-204ENST00000397545 TMEM191AQ9H0A3 160 aa9.17□□□□□ -0.94
CCDC40-204ENST00000397545 GSX1Q9H4S2 264 aaPredicted RBP9.17□□□□□ -0.94
CCDC40-204ENST00000397545 RNF24Q9Y225 148 aa9.17□□□□□ -0.94
CCDC40-204ENST00000397545 GOLT1BQ9Y3E0 138 aa9.17□□□□□ -0.94
CCDC40-204ENST00000397545 INSIG2Q9Y5U4 225 aa9.17□□□□□ -0.94
CCDC40-204ENST00000397545 NKX2-8O15522 239 aa9.17□□□□□ -0.94
CCDC40-204ENST00000397545 SMIM8Q96KF7 97 aa9.17□□□□□ -0.94
CCDC40-204ENST00000397545 CHCHD2Q9Y6H1 151 aaPredicted RBP9.17□□□□□ -0.94
CCDC40-204ENST00000397545 PCNX2A6NKB5 2137 aa9.17□□□□□ -0.94
CCDC40-204ENST00000397545 NPIPB13A6NJU9 1138 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms