RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 DCAF12Q5T6F0 453 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 ATP1A1-AS1Q5TC04 95 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 LCN15Q6UWW0 184 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 C20orf204Q6ZNR8 217 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 TBC1D26Q86UD7 250 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 TMEM252Q8N6L7 170 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 OR4D5Q8NGN0 318 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 OR2V1Q8NHB1 315 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 CT55Q8WUE5 264 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 TMEM171Q8WVE6 324 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 SPSB1Q96BD6 273 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 STARD4Q96DR4 205 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 ATP5SQ99766 215 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 ZNF586Q9NXT0 402 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 LOXL2Q9Y4K0 774 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 CADP27708 2225 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 TRAV34A0A0B4J273 112 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 C3orf85A0A1B0GTC6 90 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 hCG_38984A0A1B0GV85 526 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 LOC102725191A0A1B0GVB3 256 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 OR6C6A6NF89 314 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 DIRC3C9JPN6 131 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 ADAM20O43506 726 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 TOX4O94842 621 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 TFF1P04155 84 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 SERPINA7P05543 415 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 IGLC2P0DOY2 106 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 IGLC3P0DOY3 106 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 IL3RAP26951 378 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 RBM11P57052 281 aaKnown RBP4.26□□□□□ -1.73
SSR1-202ENST00000397511 RPL15P61313 204 aaKnown RBP4.26□□□□□ -1.73
SSR1-202ENST00000397511 PPP1CBP62140 327 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 MRPL49Q13405 166 aaKnown RBP4.26□□□□□ -1.73
SSR1-202ENST00000397511 RTP5Q14D33 572 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 VWA1Q6PCB0 445 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 Q6ZVH6 145 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 MRPL21Q7Z2W9 205 aaKnown RBP4.26□□□□□ -1.73
SSR1-202ENST00000397511 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.26□□□□□ -1.73
SSR1-202ENST00000397511 CXorf67Q86X51 503 aaPredicted RBP4.26□□□□□ -1.73
SSR1-202ENST00000397511 C1orf174Q8IYL3 243 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 TCTEX1D1Q8N7M0 179 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 ZNF596Q8TC21 504 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 NANOS1Q8WY41 292 aaKnown RBP4.26□□□□□ -1.73
SSR1-202ENST00000397511 GPR146Q96CH1 333 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 SPIN2AQ99865 258 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 SPIN2BQ9BPZ2 258 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 DECR2Q9NUI1 292 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 CLN8Q9UBY8 286 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 CDC42EP3Q9UKI2 254 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 MRPS16Q9Y3D3 137 aaKnown RBP4.26□□□□□ -1.73
SSR1-202ENST00000397511 RIF1Q5UIP0 2472 aaKnown RBP4.25□□□□□ -1.73
SSR1-202ENST00000397511 IGHV1-69-2A0A0G2JMI3 117 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 ZNF816-ZNF321PA0A0X1KG74 233 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 OR5B21A6NL26 309 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 GJE1A6NN92 205 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 PDCD6O75340 191 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 RHBDL1O75783 438 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 CA6P23280 308 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 SRD5A2P31213 254 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 CTRLP40313 264 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 FUT6P51993 359 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 CLDN18P56856 261 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 KRTDAPP60985 99 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 ZNF154Q13106 437 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 FAM78BQ5VT40 261 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 FAM53AQ6NSI3 398 aaPredicted RBP4.25□□□□□ -1.73
SSR1-202ENST00000397511 SIGLECL1Q8N7X8 197 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 OR2M7Q8NG81 312 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 MBD3L1Q8WWY6 194 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 MSI2Q96DH6 328 aaKnown RBP4.25□□□□□ -1.73
SSR1-202ENST00000397511 PLPPR2Q96GM1 343 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 SF3B5Q9BWJ5 86 aaKnown RBP4.25□□□□□ -1.73
SSR1-202ENST00000397511 FGF23Q9GZV9 251 aaPredicted RBP4.25□□□□□ -1.73
SSR1-202ENST00000397511 DEFB127Q9H1M4 99 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 ARRDC1-AS1Q9H2J1 176 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 MTCH1Q9NZJ7 389 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 TECTAO75443 2155 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 USF3Q68DE3 2245 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 PROB1E7EW31 1015 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 MPPED1O15442 326 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 ZNF737O75373 536 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 GYPAP02724 150 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 CTXN2P0C2S0 81 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 ESDP10768 282 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 FKBP2P26885 142 aaKnown RBP4.25□□□□□ -1.73
SSR1-202ENST00000397511 GABRA2P47869 451 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 SRPXP78539 464 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 RHOGP84095 191 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 MEF2BQ02080 365 aaPredicted RBP4.25□□□□□ -1.73
SSR1-202ENST00000397511 PLGLB1Q02325 96 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 DAZAP2Q15038 168 aaPredicted RBP4.25□□□□□ -1.73
SSR1-202ENST00000397511 BAGE3Q86Y29 109 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 BAGE2Q86Y30 109 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 CCDC71LQ8N9Z2 235 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 OR1K1Q8NGR3 316 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 OR5B3Q8NH48 314 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 CPT1CQ8TCG5 803 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 SCGB1C1Q8TD33 95 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 ABHD14BQ96IU4 210 aa4.25□□□□□ -1.73
SSR1-202ENST00000397511 PRO3102Q9H379 93 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms