RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 SH3BGRL3Q9H299 93 aa12.08□□□□□ -0.48
COL4A3-202ENST00000396578 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.48
COL4A3-202ENST00000396578 TRAV30A0A087WSZ9 112 aa12.08□□□□□ -0.48
COL4A3-202ENST00000396578 TLNRD1Q9H1K6 362 aa12.08□□□□□ -0.48
COL4A3-202ENST00000396578 C11orf68Q9H3H3 251 aaKnown RBP12.08□□□□□ -0.48
COL4A3-202ENST00000396578 DOCK7Q96N67 2140 aa12.08□□□□□ -0.48
COL4A3-202ENST00000396578 DOCK6Q96HP0 2047 aa12.08□□□□□ -0.48
COL4A3-202ENST00000396578 DMRTA1Q5VZB9 504 aa12.08□□□□□ -0.48
COL4A3-202ENST00000396578 HBBP68871 147 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 KLHDC2Q9Y2U9 406 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 GRIFINA4D1Z8 144 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 SLC25A53Q5H9E4 307 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 LAMTOR1Q6IAA8 161 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 OR51G1Q8NGK1 321 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 OR52M1Q8NGK5 317 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 B4E171 279 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 NPFFO15130 113 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 DRD3P35462 400 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 MFAP4P55083 255 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 CACNG7P62955 275 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 DPH3Q96FX2 82 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 LPAR2Q9HBW0 351 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 DANCRP0C864 163 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 SUMO2P61956 95 aaKnown RBP12.07□□□□□ -0.48
COL4A3-202ENST00000396578 TNFRSF9Q07011 255 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 LINC00470Q9BZP3 86 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 NPIPB8E9PQR5 432 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 NPIPB9F8W1W9 429 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 NPIPB7O75200 414 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 GPX1P07203 203 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 C8orf88P0DMB2 117 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 ID4P47928 161 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 NIT1Q86X76 327 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 PGPEP1Q9NXJ5 209 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 NXPH1P58417 271 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 AICDAQ9GZX7 198 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 GREB1Q4ZG55 1949 aa12.07□□□□□ -0.48
COL4A3-202ENST00000396578 MGST3O14880 152 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 MMD2Q8IY49 270 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 SF3B6Q9Y3B4 125 aaKnown RBP12.06□□□□□ -0.48
COL4A3-202ENST00000396578 ISG15P05161 165 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 RND3P61587 244 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 ZNF488Q96MN9 340 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 ARID2Q68CP9 1835 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 LIPFP07098 398 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 TSPOP30536 169 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 FGFRL1Q8N441 504 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 AQP3Q92482 292 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 WNT2BQ93097 391 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 MRPL32Q9BYC8 188 aaKnown RBP12.06□□□□□ -0.48
COL4A3-202ENST00000396578 OR2H2O95918 312 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 ZP4Q12836 540 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 KIAA1644Q3SXP7 199 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 CXorf66Q5JRM2 361 aaPredicted RBP12.06□□□□□ -0.48
COL4A3-202ENST00000396578 OR11H12B2RN74 326 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 HOXD4P09016 255 aaPredicted RBP12.06□□□□□ -0.48
COL4A3-202ENST00000396578 FAM27BQ5VT28 67 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 SELENOHQ8IZQ5 122 aaKnown RBP12.06□□□□□ -0.48
COL4A3-202ENST00000396578 OR11H1Q8NG94 326 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 OR11H2Q8NH07 326 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 CRYBB3P26998 211 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 TMEM92Q6UXU6 159 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 C19orf67A6NJJ6 358 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 PF4V1P10720 104 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 TCF23Q7RTU1 214 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 ZCCHC14Q8WYQ9 949 aaKnown RBP12.06□□□□□ -0.48
COL4A3-202ENST00000396578 PLSCR2Q9NRY7 297 aa12.06□□□□□ -0.48
COL4A3-202ENST00000396578 SRSF5Q13243 272 aaKnown RBP12.05□□□□□ -0.48
COL4A3-202ENST00000396578 C10orf111Q8N326 155 aa12.05□□□□□ -0.48
COL4A3-202ENST00000396578 TRBV20OR9-2A0A075B6H5 130 aa12.05□□□□□ -0.48
COL4A3-202ENST00000396578 FAM74A4Q5TZK3 123 aa12.05□□□□□ -0.48
COL4A3-202ENST00000396578 C9orf40Q8IXQ3 194 aa12.05□□□□□ -0.48
COL4A3-202ENST00000396578 WDR54Q9H977 334 aa12.05□□□□□ -0.48
COL4A3-202ENST00000396578 PGLYRP1O75594 196 aaPredicted RBP12.05□□□□□ -0.48
COL4A3-202ENST00000396578 P2RY4P51582 365 aa12.05□□□□□ -0.48
COL4A3-202ENST00000396578 RAX2Q96IS3 184 aa12.05□□□□□ -0.48
COL4A3-202ENST00000396578 IGHV5-10-1A0A0J9YXX1 117 aa12.05□□□□□ -0.48
COL4A3-202ENST00000396578 UCP2P55851 309 aa12.05□□□□□ -0.48
COL4A3-202ENST00000396578 TMEM170BQ5T4T1 132 aa12.05□□□□□ -0.48
COL4A3-202ENST00000396578 AHDC1Q5TGY3 1603 aaPredicted RBP12.05□□□□□ -0.48
COL4A3-202ENST00000396578 MARCH11A6NNE9 402 aa12.05□□□□□ -0.48
COL4A3-202ENST00000396578 HLA-DQB1P01920 261 aa12.05□□□□□ -0.48
COL4A3-202ENST00000396578 ADRA2AP08913 450 aa12.05□□□□□ -0.48
COL4A3-202ENST00000396578 CCL13Q99616 98 aa12.05□□□□□ -0.48
COL4A3-202ENST00000396578 R4GN57 208 aa12.05□□□□□ -0.48
COL4A3-202ENST00000396578 TRBV5-3A0A0A0MS03 114 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 hCG_38984A0A1B0GV85 526 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 MPV17P39210 176 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 SHISA5Q8N114 240 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 FSCN3Q9NQT6 498 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 GPR132Q9UNW8 380 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 TMEM171Q8WVE6 324 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 IGKV3OR2-268A0A0C4DH90 116 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 PQLC2LA1A4F0 135 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 TMEM250H0YL14 139 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 LCN2P80188 198 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 TMEM101Q96IK0 257 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 CEP290O15078 2479 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 TRAV8-6A0A0B4J262 113 aa12.04□□□□□ -0.48
COL4A3-202ENST00000396578 A0A1B0GWB2 263 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms