RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 IGHV1-46P01743 117 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 PTAFRP25105 342 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 RNF212Q495C1 297 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 CENPVQ7Z7K6 275 aaPredicted RBP13.71□□□□□ -0.21
TRIM39-205ENST00000396551 YPEL4Q96NS1 127 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 GCM1Q9NP62 436 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 BIN3Q9NQY0 253 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 CALYQ9NYX4 217 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 CEP250Q9BV73 2442 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 hCG_1809904A0A1W2PP81 198 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 A0A1W2PR64 198 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 A0A1W2PRV1 198 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 ZFP92A6NM28 416 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 C17orf58Q2M2W7 97 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 CYB5R2Q6BCY4 276 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 ACSM6Q6P461 480 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 PLCE1Q9P212 2302 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 TIMM9Q9Y5J7 89 aa13.71□□□□□ -0.21
TRIM39-205ENST00000396551 TET2Q6N021 2002 aaPredicted RBP13.71□□□□□ -0.21
TRIM39-205ENST00000396551 M0R1X1 148 aa13.71□□□□□ -0.22
TRIM39-205ENST00000396551 CD40P25942 277 aa13.71□□□□□ -0.22
TRIM39-205ENST00000396551 OR2B8PP59922 312 aa13.71□□□□□ -0.22
TRIM39-205ENST00000396551 FAM180AQ6UWF9 173 aa13.71□□□□□ -0.22
TRIM39-205ENST00000396551 TMEM147Q9BVK8 224 aa13.71□□□□□ -0.22
TRIM39-205ENST00000396551 FAM234AQ9H0X4 552 aa13.71□□□□□ -0.22
TRIM39-205ENST00000396551 CISD1Q9NZ45 108 aaKnown RBP13.71□□□□□ -0.22
TRIM39-205ENST00000396551 CEBPZOSA8MTT3 80 aa13.7□□□□□ -0.22
TRIM39-205ENST00000396551 RBMXL2O75526 392 aaKnown RBP13.7□□□□□ -0.22
TRIM39-205ENST00000396551 BCL2P10415 239 aa13.7□□□□□ -0.22
TRIM39-205ENST00000396551 RPP25LQ8N5L8 163 aaKnown RBP13.7□□□□□ -0.22
TRIM39-205ENST00000396551 LEAP2Q969E1 77 aa13.7□□□□□ -0.22
TRIM39-205ENST00000396551 CYB5R3P00387 301 aaPredicted RBP13.7□□□□□ -0.22
TRIM39-205ENST00000396551 TFF3Q07654 80 aa13.7□□□□□ -0.22
TRIM39-205ENST00000396551 ATP6V1FQ16864 119 aa13.7□□□□□ -0.22
TRIM39-205ENST00000396551 TGIF2LYQ8IUE0 185 aa13.7□□□□□ -0.22
TRIM39-205ENST00000396551 PINX1Q96BK5 328 aaKnown RBP13.7□□□□□ -0.22
TRIM39-205ENST00000396551 RNF7Q9UBF6 113 aa13.7□□□□□ -0.22
TRIM39-205ENST00000396551 RNF224P0DH78 156 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 TDGF1P3P51864 188 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 TNFAIP6P98066 277 aaPredicted RBP13.69□□□□□ -0.22
TRIM39-205ENST00000396551 FAM90A2PQ658T7 463 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 DOLPP1Q86YN1 238 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 OR10G4Q8NGN3 311 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 ABHD17AQ96GS6 310 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 CIB3Q96Q77 187 aaPredicted RBP13.69□□□□□ -0.22
TRIM39-205ENST00000396551 DYSFO75923 2080 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 A0A0G2JNJ9 132 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 MAP1LC3B2A6NCE7 125 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 ZNF727A8MUV8 499 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 HPRT1P00492 218 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 RAB5AP20339 215 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 RAB5BP61020 215 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 DLK1P80370 383 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 STUMQ69YW2 141 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 SSX9Q7RTT3 188 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 OR10P1Q8NGE3 313 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 MAP1LC3BQ9GZQ8 125 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 OR6C3Q9NZP0 311 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 Q9UFV3 132 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 IL19Q9UHD0 177 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 GVINP1Q7Z2Y8 2422 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 ANKRD11Q6UB99 2663 aaPredicted RBP13.69□□□□□ -0.22
TRIM39-205ENST00000396551 C15orf62A8K5M9 175 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 C1orf196B1AJZ1 125 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 AGAP20933 346 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 AARDQ4LEZ3 155 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 TCF23Q7RTU1 214 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 VKORC1L1Q8N0U8 176 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 CA5BP1Q8WTZ4 195 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 ATMQ13315 3056 aa13.69□□□□□ -0.22
TRIM39-205ENST00000396551 ZGRF1Q86YA3 2104 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 TRBV23-1A0A0A0MS06 115 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 MKRN2OSH3BPM6 223 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 OR2C1O95371 312 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 FGF7P21781 194 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 MAS1LP35410 378 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 HOXA1P49639 335 aaPredicted RBP13.68□□□□□ -0.22
TRIM39-205ENST00000396551 VWC2Q2TAL6 325 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 ZNF561Q8N587 486 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 FAM216AQ8WUB2 273 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 TVP23CQ96ET8 276 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 SDSLQ96GA7 329 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 A0A1W2PPE3 182 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 TAGLN2P37802 199 aaKnown RBP13.68□□□□□ -0.22
TRIM39-205ENST00000396551 DEFB108BQ8NET1 73 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 GAFA1Q96PS6 74 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 NCOR1P1Q9H4R4 102 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 TP53TG5Q9Y2B4 290 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 RP1L1Q8IWN7 2480 aaPredicted RBP13.68□□□□□ -0.22
TRIM39-205ENST00000396551 MDKP21741 143 aaPredicted RBP13.68□□□□□ -0.22
TRIM39-205ENST00000396551 RAB11AP62491 216 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 CT45A1Q5HYN5 189 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 CT45A3Q8NHU0 189 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 DDB2Q92466 427 aa13.68□□□□□ -0.22
TRIM39-205ENST00000396551 TRAV3A0A0B4J244 114 aa13.67□□□□□ -0.22
TRIM39-205ENST00000396551 PRAMEF5Q5TYX0 476 aa13.67□□□□□ -0.22
TRIM39-205ENST00000396551 NIPSNAP3BQ9BS92 247 aa13.67□□□□□ -0.22
TRIM39-205ENST00000396551 GFOD1Q9NXC2 390 aa13.67□□□□□ -0.22
TRIM39-205ENST00000396551 GNB2P62879 340 aa13.67□□□□□ -0.22
TRIM39-205ENST00000396551 Q8NA96 180 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms