RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 NABP2Q9BQ15 211 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 HELZ2Q9BYK8 2649 aaKnown RBP10.31□□□□□ -0.76
TRIM39-204ENST00000396548 ZFHX3Q15911 3703 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 hCG_1809904A0A1W2PP81 198 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 A0A1W2PPE2 198 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 A0A1W2PR64 198 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 A0A1W2PRV1 198 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 H0YJW9 148 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 LRRC75A-AS1Q8N1F1 130 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 OR10X1Q8NGY0 326 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 THAP6Q8TBB0 222 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 PCGF1Q9BSM1 259 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 PRELID3BQ9Y3B1 194 aa10.31□□□□□ -0.76
TRIM39-204ENST00000396548 MARCH11A6NNE9 402 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 FAM90A9PA6NNJ1 464 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 PRRX1P54821 245 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 POU2AF1Q16633 256 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 HIST2H2BCQ6DN03 193 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 MBD6Q96DN6 1003 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 PDZD2O15018 2839 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 CSMD1Q96PZ7 3565 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 HOXB4P17483 251 aaPredicted RBP10.3□□□□□ -0.76
TRIM39-204ENST00000396548 TMUB2Q71RG4 321 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 VMO1Q7Z5L0 202 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 SLC7A5P1Q8MH63 180 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 PNKDQ8N490 385 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 KCNRGQ8N5I3 272 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 AQP10Q96PS8 301 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 CACNG5Q9UF02 275 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 MSGN1A6NI15 193 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 FOXH1O75593 365 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 KRASP01116 189 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 IGKV1-16P04430 117 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 ACOT7LQ6ZUV0 252 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 KRTAP1-3Q8IUG1 177 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 OR13D1Q8NGV5 346 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 OR4S2Q8NH73 311 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 R3HDM4Q96D70 268 aa10.3□□□□□ -0.76
TRIM39-204ENST00000396548 RNASEK-C17orf49H0YIS7 233 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 OR2F2O95006 317 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 PET100P0DJ07 73 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 ARHGDIBP52566 201 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 TAGLNQ01995 201 aaKnown RBP10.29□□□□□ -0.76
TRIM39-204ENST00000396548 OR2F1Q13607 317 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 DEFB113Q30KQ7 82 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 AJUBAQ96IF1 538 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 TBX15Q96SF7 602 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 MFFQ9GZY8 342 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 INSIG2Q9Y5U4 225 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 AKAP6Q13023 2319 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 ZNF469Q96JG9 3925 aaPredicted RBP10.29□□□□□ -0.76
TRIM39-204ENST00000396548 TOR1AO14656 332 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 RGS13O14921 159 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 ST8SIA3O43173 380 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 TMEM50AO95807 157 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 OR9G9P0C7N8 305 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 HKR1P10072 659 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 PAX9P55771 341 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 S100A10P60903 97 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 PAX8Q06710 450 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 CLEC12BQ2HXU8 276 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 PDLIM3Q53GG5 364 aaPredicted RBP10.29□□□□□ -0.76
TRIM39-204ENST00000396548 DHRS7BQ6IAN0 325 aaPredicted RBP10.29□□□□□ -0.76
TRIM39-204ENST00000396548 DCUN1D4Q92564 292 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 SIRT7Q9NRC8 400 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 ZFP57Q9NU63 452 aa10.29□□□□□ -0.76
TRIM39-204ENST00000396548 SRRM4A7MD48 611 aaKnown RBP10.28□□□□□ -0.76
TRIM39-204ENST00000396548 ATG12O94817 140 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 S100A11P31949 105 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 NKX2-1P43699 371 aaPredicted RBP10.28□□□□□ -0.76
TRIM39-204ENST00000396548 REG1BP48304 166 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 KLRD1Q13241 179 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 TMEM177Q53S58 311 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 GON7Q9BXV9 100 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 LSM5Q9Y4Y9 91 aaKnown RBP10.28□□□□□ -0.76
TRIM39-204ENST00000396548 L7N2F9 121 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 SCGB1D2O95969 90 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 NQO2P16083 231 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 SLC25A16P16260 332 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 EPHA1P21709 976 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 COX7A1P24310 79 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 AKR1C2P52895 323 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 DVL1P1P54792 670 aaPredicted RBP10.28□□□□□ -0.76
TRIM39-204ENST00000396548 POLR2GP62487 172 aaKnown RBP eCLIP10.28□□□□□ -0.76
TRIM39-204ENST00000396548 SLA2Q9H6Q3 261 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 HSPB7Q9UBY9 170 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 A0A0D9SG52 128 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 FAM90A26D6RGX4 464 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 RRASP10301 218 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 OPCMLQ14982 345 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 THOC7Q6I9Y2 204 aaKnown RBP10.28□□□□□ -0.76
TRIM39-204ENST00000396548 VKORC1L1Q8N0U8 176 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 SLC35D1Q9NTN3 355 aa10.28□□□□□ -0.76
TRIM39-204ENST00000396548 A0A1W2PPI3 338 aa10.27□□□□□ -0.77
TRIM39-204ENST00000396548 E5RGE8 158 aa10.27□□□□□ -0.77
TRIM39-204ENST00000396548 CRYZL1O95825 349 aa10.27□□□□□ -0.77
TRIM39-204ENST00000396548 IGLV2-23P01705 113 aa10.27□□□□□ -0.77
TRIM39-204ENST00000396548 IL3RAP26951 378 aa10.27□□□□□ -0.77
TRIM39-204ENST00000396548 RELBQ01201 579 aa10.27□□□□□ -0.77
TRIM39-204ENST00000396548 HABP2Q14520 560 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms