RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 A0A1B0GV50 99 aa13.35□□□□□ -0.27
SNX6-202ENST00000396526 NUPL2O15504 423 aaKnown RBP13.35□□□□□ -0.27
SNX6-202ENST00000396526 HRASP01112 189 aa13.35□□□□□ -0.27
SNX6-202ENST00000396526 ZNF273Q14593 569 aa13.35□□□□□ -0.27
SNX6-202ENST00000396526 LRRC75BQ2VPJ9 315 aa13.35□□□□□ -0.27
SNX6-202ENST00000396526 ZCCHC24Q8N2G6 241 aaKnown RBP13.35□□□□□ -0.27
SNX6-202ENST00000396526 TMEM147Q9BVK8 224 aa13.35□□□□□ -0.27
SNX6-202ENST00000396526 PARD6GQ9BYG4 376 aaPredicted RBP13.35□□□□□ -0.27
SNX6-202ENST00000396526 DIDO1Q9BTC0 2240 aaKnown RBP13.35□□□□□ -0.27
SNX6-202ENST00000396526 SPCS3P61009 180 aa13.35□□□□□ -0.27
SNX6-202ENST00000396526 SSX9Q7RTT3 188 aa13.35□□□□□ -0.27
SNX6-202ENST00000396526 OR4C12Q96R67 309 aa13.35□□□□□ -0.27
SNX6-202ENST00000396526 KIAA1456Q9P272 454 aa13.35□□□□□ -0.27
SNX6-202ENST00000396526 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.34□□□□□ -0.27
SNX6-202ENST00000396526 DAOP14920 347 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 BRWD1-AS2P59051 145 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 FBXL19-AS1Q494R0 122 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 CT45A1Q5HYN5 189 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 CT45A3Q8NHU0 189 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 RPUSD1Q9UJJ7 312 aaKnown RBP13.34□□□□□ -0.27
SNX6-202ENST00000396526 E7EQL1 145 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 ATF4P18848 351 aaPredicted RBP13.34□□□□□ -0.27
SNX6-202ENST00000396526 ZNF295-AS1Q8N0V1 137 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 H1FXQ92522 213 aaKnown RBP13.34□□□□□ -0.27
SNX6-202ENST00000396526 SLC35B3Q9H1N7 401 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 LINC00574Q9H8X3 128 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 A0A1B0GW64 132 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 SHISA9B4DS77 424 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 ZG16O60844 167 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 ADCYAP1P18509 176 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 ZNF134P52741 427 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 EFNB3Q15768 340 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 RTL8BQ17RB0 113 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 HFEQ30201 348 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 WDR61Q9GZS3 305 aaKnown RBP13.34□□□□□ -0.27
SNX6-202ENST00000396526 ENY2Q9NPA8 101 aa13.34□□□□□ -0.27
SNX6-202ENST00000396526 HEYLQ9NQ87 328 aaPredicted RBP13.34□□□□□ -0.27
SNX6-202ENST00000396526 CISD1Q9NZ45 108 aaKnown RBP13.34□□□□□ -0.27
SNX6-202ENST00000396526 DYSFO75923 2080 aa13.33□□□□□ -0.27
SNX6-202ENST00000396526 CA5BP1Q8WTZ4 195 aa13.33□□□□□ -0.28
SNX6-202ENST00000396526 ZNF714Q96N38 554 aa13.33□□□□□ -0.28
SNX6-202ENST00000396526 GNG10P50151 68 aa13.33□□□□□ -0.28
SNX6-202ENST00000396526 OR52E5Q8NH55 327 aa13.33□□□□□ -0.28
SNX6-202ENST00000396526 TAF15Q92804 592 aaKnown RBP eCLIP13.33□□□□□ -0.284e-6■■□□□ 11.5
SNX6-202ENST00000396526 LEAP2Q969E1 77 aa13.33□□□□□ -0.28
SNX6-202ENST00000396526 FRYQ5TBA9 3013 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 UBE2L5PA0A1B0GUS4 154 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 MED19A0JLT2 244 aaPredicted RBP13.32□□□□□ -0.28
SNX6-202ENST00000396526 ATXN7O15265 892 aaPredicted RBP13.32□□□□□ -0.28
SNX6-202ENST00000396526 GPR37O15354 613 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 IFNA10P01566 189 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 MBP02144 154 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 LINC00205P59089 165 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 DUX4L9Q6RFH8 374 aaPredicted RBP13.32□□□□□ -0.28
SNX6-202ENST00000396526 DCAF16Q9NXF7 216 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 TIMM9Q9Y5J7 89 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 SAA2-SAA4A0A096LPE2 208 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 A0A1W2PPE3 182 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 RBFOX3A6NFN3 312 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 PROP1O75360 226 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 SAA2P0DJI9 122 aaPredicted RBP13.32□□□□□ -0.28
SNX6-202ENST00000396526 ARL16Q0P5N6 197 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 RSG1Q9BU20 258 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 C17orf112F2Z3M2 114 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 SOHLH1Q5JUK2 328 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 LINC01560Q8TB33 94 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 RHOVQ96L33 236 aa13.32□□□□□ -0.28
SNX6-202ENST00000396526 IGHV1-69-2A0A0G2JMI3 117 aa13.31□□□□□ -0.28
SNX6-202ENST00000396526 SLC31A2O15432 143 aa13.31□□□□□ -0.28
SNX6-202ENST00000396526 RAB11AP62491 216 aa13.31□□□□□ -0.28
SNX6-202ENST00000396526 DHRS7BQ6IAN0 325 aaPredicted RBP13.31□□□□□ -0.28
SNX6-202ENST00000396526 QTRT1Q9BXR0 403 aaKnown RBP13.31□□□□□ -0.28
SNX6-202ENST00000396526 TMEM140Q9NV12 185 aa13.31□□□□□ -0.28
SNX6-202ENST00000396526 DSCAMO60469 2012 aa13.31□□□□□ -0.28
SNX6-202ENST00000396526 OR2B8PP59922 312 aa13.31□□□□□ -0.28
SNX6-202ENST00000396526 CLRN3Q8NCR9 226 aa13.31□□□□□ -0.28
SNX6-202ENST00000396526 PKDREJQ9NTG1 2253 aa13.31□□□□□ -0.28
SNX6-202ENST00000396526 DNASE2O00115 360 aaPredicted RBP13.31□□□□□ -0.28
SNX6-202ENST00000396526 IFNA1P01562 189 aa13.31□□□□□ -0.28
SNX6-202ENST00000396526 APOA2P02652 100 aa13.31□□□□□ -0.28
SNX6-202ENST00000396526 GNB2P62879 340 aa13.31□□□□□ -0.28
SNX6-202ENST00000396526 HEPN1Q6WQI6 88 aa13.31□□□□□ -0.28
SNX6-202ENST00000396526 PPIHO43447 177 aaKnown RBP13.3□□□□□ -0.28
SNX6-202ENST00000396526 OR9G9P0C7N8 305 aa13.3□□□□□ -0.28
SNX6-202ENST00000396526 SLC25A48Q6ZT89 311 aaKnown RBP13.3□□□□□ -0.28
SNX6-202ENST00000396526 HAPLN4Q86UW8 402 aa13.3□□□□□ -0.28
SNX6-202ENST00000396526 TGIF2LYQ8IUE0 185 aa13.3□□□□□ -0.28
SNX6-202ENST00000396526 ZDHHC16Q969W1 377 aa13.3□□□□□ -0.28
SNX6-202ENST00000396526 TRAV1-1A0A0B4J248 108 aa13.3□□□□□ -0.28
SNX6-202ENST00000396526 M0R036 132 aa13.3□□□□□ -0.28
SNX6-202ENST00000396526 HOXA1P49639 335 aaPredicted RBP13.3□□□□□ -0.28
SNX6-202ENST00000396526 TMEM41BQ5BJD5 291 aa13.3□□□□□ -0.28
SNX6-202ENST00000396526 MUC15Q8N387 334 aa13.3□□□□□ -0.28
SNX6-202ENST00000396526 RPRMQ9NS64 109 aa13.3□□□□□ -0.28
SNX6-202ENST00000396526 SLC35D1Q9NTN3 355 aa13.3□□□□□ -0.28
SNX6-202ENST00000396526 SLC39A9Q9NUM3 307 aa13.3□□□□□ -0.28
SNX6-202ENST00000396526 RFNGQ9Y644 331 aa13.3□□□□□ -0.28
SNX6-202ENST00000396526 SOX15O60248 233 aa13.29□□□□□ -0.28
SNX6-202ENST00000396526 FGF7P21781 194 aa13.29□□□□□ -0.28
SNX6-202ENST00000396526 ZNF429Q86V71 674 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms