RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 VMA21Q3ZAQ7 101 aa13.24□□□□□ -0.29
EXOSC3-202ENST00000396521 CD300EQ496F6 205 aaPredicted RBP13.24□□□□□ -0.29
EXOSC3-202ENST00000396521 HSD17B12Q53GQ0 312 aa13.24□□□□□ -0.29
EXOSC3-202ENST00000396521 LAIR2Q6ISS4 152 aa13.24□□□□□ -0.29
EXOSC3-202ENST00000396521 DYNLRB2Q8TF09 96 aa13.24□□□□□ -0.29
EXOSC3-202ENST00000396521 ADTRPQ96IZ2 230 aa13.24□□□□□ -0.29
EXOSC3-202ENST00000396521 CMSS1Q9BQ75 279 aaKnown RBP13.24□□□□□ -0.29
EXOSC3-202ENST00000396521 ZNF785A8K8V0 405 aa13.23□□□□□ -0.29
EXOSC3-202ENST00000396521 OR11H12B2RN74 326 aa13.23□□□□□ -0.29
EXOSC3-202ENST00000396521 SOCS1O15524 211 aa13.23□□□□□ -0.29
EXOSC3-202ENST00000396521 TRBV12-3P01733 135 aa13.23□□□□□ -0.29
EXOSC3-202ENST00000396521 LINC00205P59089 165 aa13.23□□□□□ -0.29
EXOSC3-202ENST00000396521 MRPS15P82914 257 aaKnown RBP13.23□□□□□ -0.29
EXOSC3-202ENST00000396521 SPIN2AQ99865 258 aa13.23□□□□□ -0.29
EXOSC3-202ENST00000396521 SPIN2BQ9BPZ2 258 aa13.23□□□□□ -0.29
EXOSC3-202ENST00000396521 A0A0A6YYD4 124 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 TRBV9A0A0B4J1U6 114 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 PTGES3LE9PB15 166 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 MPPED1O15442 326 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 ACTL6BO94805 426 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 KIR2DS2P43631 304 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 UBE2KP61086 200 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 RHOGP84095 191 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 PRSS8Q16651 343 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 DEFB114Q30KQ6 69 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 SLC16A13Q7RTY0 426 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 SLC25A42Q86VD7 318 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 NECAP1Q8NC96 275 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 OR56B1Q8NGI3 324 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 OR10J5Q8NHC4 309 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 FAM110AQ9BQ89 295 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 HDHD3Q9BSH5 251 aaPredicted RBP13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 SRD5A3Q9H8P0 318 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 RETNQ9HD89 108 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 ZC4H2Q9NQZ6 224 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 ADAM30Q9UKF2 790 aa13.22□□□□□ -0.29
EXOSC3-202ENST00000396521 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 IGKV1-6A0A0C4DH72 117 aa13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 RBMY1BA6NDE4 496 aaKnown RBP13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 RBMY1EA6NEQ0 496 aaKnown RBP13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 FOXI3A8MTJ6 420 aaPredicted RBP13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 LGALS9O00182 355 aa13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 BMPR1BO00238 502 aa13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 DENRO43583 198 aaKnown RBP13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 UCHL1P09936 223 aa13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 RBMY1DP0C7P1 496 aaKnown RBP13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 SNRPBP14678 240 aaKnown RBP13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 EXOSC2Q13868 293 aaKnown RBP13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 CEACAM19Q7Z692 300 aa13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 OSR1Q8TAX0 266 aaPredicted RBP13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 MND1Q9BWT6 205 aa13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 CCDC90BQ9GZT6 254 aa13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 OR2D2Q9H210 308 aa13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 PLGRKTQ9HBL7 147 aa13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 AKIP1Q9NQ31 210 aa13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 FKBP14Q9NWM8 211 aa13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 SDHAF2Q9NX18 166 aa13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 ZNF230Q9UIE0 474 aaPredicted RBP13.21□□□□□ -0.29
EXOSC3-202ENST00000396521 SRRM4A7MD48 611 aaKnown RBP13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 SLC17A2O00624 439 aa13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 FABP7O15540 132 aa13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 RGS10O43665 173 aa13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 CDK1P06493 297 aa13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 TMEM50BP56557 158 aa13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 INSL4Q14641 139 aa13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 P2RY14Q15391 338 aa13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 SSX1Q16384 188 aa13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 TNXAQ16473 311 aa13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 GUCA2BQ16661 112 aa13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 ANKRD55Q3KP44 614 aa13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 DEFB125Q8N687 156 aa13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 SRSF12Q8WXF0 261 aaKnown RBP13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 LINC00476Q8WZB0 136 aa13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 ARHGAP5-AS1Q96IT6 56 aa13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 PECRQ9BY49 303 aa13.2□□□□□ -0.3
EXOSC3-202ENST00000396521 GGCTO75223 188 aaKnown RBP13.19□□□□□ -0.3
EXOSC3-202ENST00000396521 CD7P09564 240 aa13.19□□□□□ -0.3
EXOSC3-202ENST00000396521 FOLR2P14207 255 aa13.19□□□□□ -0.3
EXOSC3-202ENST00000396521 CRHBPP24387 322 aa13.19□□□□□ -0.3
EXOSC3-202ENST00000396521 PSMD7P51665 324 aa13.19□□□□□ -0.3
EXOSC3-202ENST00000396521 TTC9CQ8N5M4 171 aa13.19□□□□□ -0.3
EXOSC3-202ENST00000396521 CABLES2Q9BTV7 478 aa13.19□□□□□ -0.3
EXOSC3-202ENST00000396521 RBM7Q9Y580 266 aaKnown RBP13.19□□□□□ -0.3
EXOSC3-202ENST00000396521 TRBV6-7A0A0A0MS04 114 aa13.18□□□□□ -0.3
EXOSC3-202ENST00000396521 C2orf70A6NJV1 201 aa13.18□□□□□ -0.3
EXOSC3-202ENST00000396521 ARL6IP5O75915 188 aa13.18□□□□□ -0.3
EXOSC3-202ENST00000396521 CD3GP09693 182 aa13.18□□□□□ -0.3
EXOSC3-202ENST00000396521 GABARAPL2P60520 117 aa13.18□□□□□ -0.3
EXOSC3-202ENST00000396521 SPHARQ15513 63 aa13.18□□□□□ -0.3
EXOSC3-202ENST00000396521 MRGPRG-AS1Q2M3A8 158 aa13.18□□□□□ -0.3
EXOSC3-202ENST00000396521 GPHB5Q86YW7 130 aa13.18□□□□□ -0.3
EXOSC3-202ENST00000396521 MMD2Q8IY49 270 aa13.18□□□□□ -0.3
EXOSC3-202ENST00000396521 ACOT12Q8WYK0 555 aa13.18□□□□□ -0.3
EXOSC3-202ENST00000396521 KCNK15Q9H427 330 aa13.18□□□□□ -0.3
EXOSC3-202ENST00000396521 ZNF257Q9Y2Q1 563 aa13.18□□□□□ -0.3
EXOSC3-202ENST00000396521 NUPR2A6NF83 97 aa13.17□□□□□ -0.3
EXOSC3-202ENST00000396521 BET1O15155 118 aa13.17□□□□□ -0.3
EXOSC3-202ENST00000396521 RBMXL2O75526 392 aaKnown RBP13.17□□□□□ -0.3
EXOSC3-202ENST00000396521 NDUFB8O95169 186 aa13.17□□□□□ -0.3
EXOSC3-202ENST00000396521 APELAP0DMC3 54 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms