RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 PPIAL4AQ9Y536 164 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 ATRXP46100 2492 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 USF3Q68DE3 2245 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 SAA2-SAA4A0A096LPE2 208 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.34□□□□□ -0.43
CBX3-202ENST00000396386 FAM157AC9JC47 383 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 PPIHO43447 177 aaKnown RBP12.34□□□□□ -0.43
CBX3-202ENST00000396386 SNAPINO95295 136 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 SAA2P0DJI9 122 aaPredicted RBP12.34□□□□□ -0.43
CBX3-202ENST00000396386 ZNF273Q14593 569 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 EFNB3Q15768 340 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 PRAMEF5Q5TYX0 476 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 THNSL2Q86YJ6 484 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 OR4S2Q8NH73 311 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 OR4C12Q96R67 309 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 GAL3ST2Q9H3Q3 398 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 NDRG3Q9UGV2 375 aa12.34□□□□□ -0.43
CBX3-202ENST00000396386 BSNQ9UPA5 3926 aa12.33□□□□□ -0.44
CBX3-202ENST00000396386 SMG1Q96Q15 3661 aaKnown RBP12.33□□□□□ -0.44
CBX3-202ENST00000396386 BTBD17A6NE02 478 aa12.33□□□□□ -0.44
CBX3-202ENST00000396386 CEBPZOSA8MTT3 80 aa12.33□□□□□ -0.44
CBX3-202ENST00000396386 ZG16O60844 167 aa12.33□□□□□ -0.44
CBX3-202ENST00000396386 OR8U8P0C7N1 319 aa12.33□□□□□ -0.44
CBX3-202ENST00000396386 APOBEC3AP31941 199 aaPredicted RBP12.33□□□□□ -0.44
CBX3-202ENST00000396386 THBS3P49746 956 aa12.33□□□□□ -0.44
CBX3-202ENST00000396386 MEF2CQ06413 473 aaPredicted RBP12.33□□□□□ -0.44
CBX3-202ENST00000396386 UTF1Q5T230 341 aa12.33□□□□□ -0.44
CBX3-202ENST00000396386 KDF1Q8NAX2 398 aaPredicted RBP12.33□□□□□ -0.44
CBX3-202ENST00000396386 DDB2Q92466 427 aa12.33□□□□□ -0.44
CBX3-202ENST00000396386 ADTRPQ96IZ2 230 aa12.33□□□□□ -0.44
CBX3-202ENST00000396386 PSMG3Q9BT73 122 aaPredicted RBP12.33□□□□□ -0.44
CBX3-202ENST00000396386 MS4A5Q9H3V2 200 aa12.33□□□□□ -0.44
CBX3-202ENST00000396386 RPUSD1Q9UJJ7 312 aaKnown RBP12.33□□□□□ -0.44
CBX3-202ENST00000396386 FBXO7Q9Y3I1 522 aa12.33□□□□□ -0.44
CBX3-202ENST00000396386 A0A1W2PPE3 182 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 B9A039 149 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 C9JQL5 133 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 DNASE2O00115 360 aaPredicted RBP12.32□□□□□ -0.44
CBX3-202ENST00000396386 OR9G9P0C7N8 305 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 C1QTNF9P0C862 333 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 GNG10P50151 68 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 PPT1P50897 306 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 OR2B8PP59922 312 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 LRRC75BQ2VPJ9 315 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 AARDQ4LEZ3 155 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 OR8G2PQ6IF36 304 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 UNQ6494/PRO21346Q6UXR6 183 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 CCL17Q92583 94 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 ZDHHC16Q969W1 377 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 QTRT1Q9BXR0 403 aaKnown RBP12.32□□□□□ -0.44
CBX3-202ENST00000396386 EIF5A2Q9GZV4 153 aaKnown RBP12.32□□□□□ -0.44
CBX3-202ENST00000396386 KPTNQ9Y664 436 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 BAHCC1Q9P281 2608 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 PIEZO2Q9H5I5 2752 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 ATMQ13315 3056 aa12.32□□□□□ -0.44
CBX3-202ENST00000396386 UBE2L5PA0A1B0GUS4 154 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 A0A1B0GV50 99 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 A0A1B0GW64 132 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 TSPAN4O14817 238 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 LY86O95711 162 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 H2AFB1P0C5Y9 115 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 NQO2P16083 231 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 MRPS11P82912 194 aaKnown RBP12.31□□□□□ -0.44
CBX3-202ENST00000396386 TLE4Q04727 773 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 LYG1Q8N1E2 194 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 OR10A7Q8NGE5 316 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 RSG1Q9BU20 258 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 SCRT1Q9BWW7 348 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 HCFC1P51610 2035 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 DIDO1Q9BTC0 2240 aaKnown RBP12.31□□□□□ -0.44
CBX3-202ENST00000396386 FAM74A7A6NL05 159 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 SCAF4O95104 1147 aaKnown RBP12.31□□□□□ -0.44
CBX3-202ENST00000396386 HBE1P02100 147 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 RPL31P62899 125 aaKnown RBP12.31□□□□□ -0.44
CBX3-202ENST00000396386 ATP6V1FQ16864 119 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 FAM74A3Q4VXF1 159 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 SLC25A48Q6ZT89 311 aaKnown RBP12.31□□□□□ -0.44
CBX3-202ENST00000396386 SSX9Q7RTT3 188 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 OR4A16Q8NH70 328 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 LINC01560Q8TB33 94 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 ZNF251Q9BRH9 671 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 TMEM147Q9BVK8 224 aa12.31□□□□□ -0.44
CBX3-202ENST00000396386 WDR61Q9GZS3 305 aaKnown RBP12.31□□□□□ -0.44
CBX3-202ENST00000396386 GPR37O15354 613 aa12.3□□□□□ -0.44
CBX3-202ENST00000396386 NUPL2O15504 423 aaKnown RBP12.3□□□□□ -0.44
CBX3-202ENST00000396386 NDUFB3O43676 98 aa12.3□□□□□ -0.44
CBX3-202ENST00000396386 MMP23AO75900 390 aa12.3□□□□□ -0.44
CBX3-202ENST00000396386 F12P00748 615 aaPredicted RBP12.3□□□□□ -0.44
CBX3-202ENST00000396386 DAOP14920 347 aa12.3□□□□□ -0.44
CBX3-202ENST00000396386 RAB2AP61019 212 aa12.3□□□□□ -0.44
CBX3-202ENST00000396386 TAGLNQ01995 201 aaKnown RBP12.3□□□□□ -0.44
CBX3-202ENST00000396386 SPINK9Q5DT21 86 aa12.3□□□□□ -0.44
CBX3-202ENST00000396386 SPSB3Q6PJ21 355 aa12.3□□□□□ -0.44
CBX3-202ENST00000396386 C1orf229Q6ZS94 237 aaPredicted RBP12.3□□□□□ -0.44
CBX3-202ENST00000396386 PINX1Q96BK5 328 aaKnown RBP12.3□□□□□ -0.44
CBX3-202ENST00000396386 CLCC1Q96S66 551 aa12.3□□□□□ -0.44
CBX3-202ENST00000396386 TMEM140Q9NV12 185 aa12.3□□□□□ -0.44
CBX3-202ENST00000396386 KIAA1456Q9P272 454 aa12.3□□□□□ -0.44
CBX3-202ENST00000396386 ICE1Q9Y2F5 2266 aa12.3□□□□□ -0.44
CBX3-202ENST00000396386 IFNA17P01571 189 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms