RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 LYZL2Q7Z4W2 148 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 MOB3BQ86TA1 216 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 ZNF383Q8NA42 475 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 MAPK1IP1LQ8NDC0 245 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 DMBX1Q8NFW5 382 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 DDB2Q92466 427 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 LSM10Q969L4 123 aaKnown RBP12.51□□□□□ -0.41
VAMP1-202ENST00000396308 NABP2Q9BQ15 211 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 ITGB1BP2Q9UKP3 347 aa12.51□□□□□ -0.41
VAMP1-202ENST00000396308 ABCA12Q86UK0 2595 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 IGHV1-3A0A0C4DH29 117 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 RAMP3O60896 148 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 S1PR2O95136 353 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 PET100P0DJ07 73 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 NQO2P16083 231 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 FGL1Q08830 312 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 IAH1Q2TAA2 248 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-202ENST00000396308 HCP5Q6MZN7 132 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 H2BFWTQ7Z2G1 175 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 TCTE3Q8IZS6 198 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 LHFPL5Q8TAF8 219 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 R3HDM4Q96D70 268 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 C2orf50Q96LR7 162 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 NEURL2Q9BR09 285 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 RANBP3Q9H6Z4 567 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-202ENST00000396308 RANGRFQ9HD47 186 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-202ENST00000396308 ZFP57Q9NU63 452 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 APCP25054 2843 aa12.5□□□□□ -0.41
VAMP1-202ENST00000396308 CENPEQ02224 2701 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 IGHV1-69DA0A0B4J2H0 117 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 H0YJW9 148 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 SMAD7O15105 426 aaKnown RBP12.49□□□□□ -0.41
VAMP1-202ENST00000396308 SHOXO15266 292 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 PROP1O75360 226 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 SIX6O95475 246 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 IGHV1-69P01742 117 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 HNRNPCP07910 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
VAMP1-202ENST00000396308 SAA4P35542 130 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 SMCO1Q147U7 214 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 ZNF585BQ52M93 769 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 OR5AN1Q8NGI8 311 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 OR4C13Q8NGP0 309 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 OSR1Q8TAX0 266 aaPredicted RBP12.49□□□□□ -0.41
VAMP1-202ENST00000396308 FLYWCH2Q96CP2 140 aaKnown RBP12.49□□□□□ -0.41
VAMP1-202ENST00000396308 MALSU1Q96EH3 234 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 NMES1Q9C002 83 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 HILPDAQ9Y5L2 63 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 MMP24Q9Y5R2 645 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 TACC2O95359 2948 aa12.49□□□□□ -0.41
VAMP1-202ENST00000396308 WNK2Q9Y3S1 2297 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 CENPVL3A0A0U1RRI6 287 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 MARCH11A6NNE9 402 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 LY6LH3BQJ8 138 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 OR2A4O95047 310 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 KRASP01116 189 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 SLC25A6P12236 298 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 BRS3P32247 399 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 H2BFSP57053 126 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 BPIFB3P59826 476 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 C2orf68Q2NKX9 166 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 ZFP69Q49AA0 526 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 OR2T35Q8NGX2 323 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 OR1S1Q8NH92 325 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 ST6GAL2Q96JF0 529 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 HARBI1Q96MB7 349 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 OR2A7Q96R45 310 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 GSKIPQ9P0R6 139 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 CACFD1Q9UGQ2 172 aa12.48□□□□□ -0.41
VAMP1-202ENST00000396308 PRRC2AP48634 2157 aaKnown RBP12.47□□□□□ -0.41
VAMP1-202ENST00000396308 A0A1B0GU03 582 aa12.47□□□□□ -0.41
VAMP1-202ENST00000396308 RBMXL2O75526 392 aaKnown RBP12.47□□□□□ -0.41
VAMP1-202ENST00000396308 G6PCP35575 357 aa12.47□□□□□ -0.41
VAMP1-202ENST00000396308 RPS16P62249 146 aaKnown RBP12.47□□□□□ -0.41
VAMP1-202ENST00000396308 SSX2Q16385 188 aa12.47□□□□□ -0.41
VAMP1-202ENST00000396308 C1orf229Q6ZS94 237 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-202ENST00000396308 LHFPL4Q7Z7J7 247 aa12.47□□□□□ -0.41
VAMP1-202ENST00000396308 ZBTB8BQ8NAP8 495 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-202ENST00000396308 VSTM2AQ8TAG5 236 aa12.47□□□□□ -0.41
VAMP1-202ENST00000396308 SEC22AQ96IW7 307 aa12.47□□□□□ -0.41
VAMP1-202ENST00000396308 MS4A7Q9GZW8 240 aaPredicted RBP12.47□□□□□ -0.41
VAMP1-202ENST00000396308 FAM96BQ9Y3D0 163 aa12.47□□□□□ -0.41
VAMP1-202ENST00000396308 POLQO75417 2590 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 A0A1W2PPI3 338 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 FAM90A9PA6NNJ1 464 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 WRBO00258 174 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 TIMM23O14925 209 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 SNAPC5O75971 98 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 SCGB1D2O95969 90 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 IGKV1-39P01597 117 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 IGKV1D-39P04432 117 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 CD1BP29016 333 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 LINC00205P59089 165 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 S100A10P60903 97 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 SRSF4Q08170 494 aaKnown RBP12.46□□□□□ -0.41
VAMP1-202ENST00000396308 DIAPH2-AS1Q14236 149 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 VMA21Q3ZAQ7 101 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 TMEM177Q53S58 311 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 NMSQ5H8A3 153 aa12.46□□□□□ -0.41
VAMP1-202ENST00000396308 FYTTD1Q96QD9 318 aaKnown RBP12.46□□□□□ -0.41
VAMP1-202ENST00000396308 TSNAXQ99598 290 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms