RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 OR2C1O95371 312 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 RND2P52198 227 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 STUMQ69YW2 141 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 OR8G2PQ6IF36 304 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 VKORC1L1Q8N0U8 176 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 NPCDR1Q9BY65 106 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 LINC00574Q9H8X3 128 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 SDF2L1Q9HCN8 221 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 PIGBOS1A0A0B4J2F0 54 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 MMP23AO75900 390 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 TDGF1P3P51864 188 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 RELBQ01201 579 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 EIF2S3LQ2VIR3 472 aaKnown RBP12.69□□□□□ -0.38
CPSF7-202ENST00000394888 SNRNP40Q96DI7 357 aaKnown RBP12.69□□□□□ -0.38
CPSF7-202ENST00000394888 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-202ENST00000394888 OR6C3Q9NZP0 311 aa12.69□□□□□ -0.38
CPSF7-202ENST00000394888 TIMP3P35625 211 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 MEOX2P50222 304 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 TCTEX1D1Q8N7M0 179 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 HSD17B10Q99714 261 aaKnown RBP12.68□□□□□ -0.38
CPSF7-202ENST00000394888 GCM1Q9NP62 436 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 IFNA5P01569 189 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 ELLP55199 621 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-202ENST00000394888 CT45A1Q5HYN5 189 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 MOGAT3Q86VF5 341 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 CT45A3Q8NHU0 189 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 LEAP2Q969E1 77 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 SNX22Q96L94 193 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 PLCE1Q9P212 2302 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 JPT1Q9UK76 154 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 RBM7Q9Y580 266 aaKnown RBP12.68□□□□□ -0.38
CPSF7-202ENST00000394888 IGHV3-7P01780 117 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 HBE1P02100 147 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 OR2B8PP59922 312 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 TLE1Q04724 770 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 EDDM3AQ14507 147 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 FIP1L1Q6UN15 594 aaKnown RBP12.68□□□□□ -0.38
CPSF7-202ENST00000394888 C1orf174Q8IYL3 243 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 PIEZO2Q9H5I5 2752 aa12.68□□□□□ -0.38
CPSF7-202ENST00000394888 CNOT1A5YKK6 2376 aaKnown RBP12.67□□□□□ -0.38
CPSF7-202ENST00000394888 ADH4P08319 380 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 GLRXP35754 106 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 HBG1P69891 147 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 HBG2P69892 147 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 HNF4GQ14541 408 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 GCSAMLQ5JQS6 135 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 ITLN1Q8WWA0 313 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 TVP23CQ96ET8 276 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 GAFA1Q96PS6 74 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 ZFP92A6NM28 416 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 YIF1AO95070 293 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 MAP1LC3B2A6NCE7 125 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 M0R1B8 84 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 IGHV1-46P01743 117 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 GCH1P30793 250 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 Q8NA96 180 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 RNASE11Q8TAA1 199 aaKnown RBP12.67□□□□□ -0.38
CPSF7-202ENST00000394888 MAP1LC3BQ9GZQ8 125 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 GAB2Q9UQC2 676 aa12.67□□□□□ -0.38
CPSF7-202ENST00000394888 RRHO14718 337 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 MGST3O14880 152 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 CLN5O75503 358 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 HOXC12P31275 282 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 FAM27E3Q08E93 113 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 C1orf185Q5T7R7 199 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 ADAM5Q6NVV9 412 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 LILRB2Q8N423 598 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 R3HDM4Q96D70 268 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 NCOR1P1Q9H4R4 102 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 TAGLN2P37802 199 aaKnown RBP12.66□□□□□ -0.38
CPSF7-202ENST00000394888 RAB5BP61020 215 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 LTC4SQ16873 150 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 SDSLQ96GA7 329 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 P2RX4Q99571 388 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 ZNRD1Q9P1U0 126 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 FAM90A9PA6NNJ1 464 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 C1orf196B1AJZ1 125 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 HMGB3O15347 200 aaKnown RBP12.66□□□□□ -0.38
CPSF7-202ENST00000394888 GFRA3O60609 400 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 TMPRSS3P57727 454 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 FABP9Q0Z7S8 132 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 TMEM147Q9BVK8 224 aa12.66□□□□□ -0.38
CPSF7-202ENST00000394888 A8MXE2 369 aa12.65□□□□□ -0.38
CPSF7-202ENST00000394888 ABHD5Q8WTS1 349 aa12.65□□□□□ -0.38
CPSF7-202ENST00000394888 TMEM242Q9NWH2 141 aa12.65□□□□□ -0.38
CPSF7-202ENST00000394888 VAX2Q9UIW0 290 aa12.65□□□□□ -0.38
CPSF7-202ENST00000394888 CXorf65A6NEN9 183 aa12.65□□□□□ -0.38
CPSF7-202ENST00000394888 SEC14L6B5MCN3 397 aa12.65□□□□□ -0.38
CPSF7-202ENST00000394888 THBDP07204 575 aa12.65□□□□□ -0.38
CPSF7-202ENST00000394888 MRGPRGQ86SM5 289 aa12.65□□□□□ -0.38
CPSF7-202ENST00000394888 ZADH2Q8N4Q0 377 aa12.65□□□□□ -0.38
CPSF7-202ENST00000394888 WDR83OSQ9Y284 106 aa12.65□□□□□ -0.38
CPSF7-202ENST00000394888 TRAT1Q6PIZ9 186 aa12.65□□□□□ -0.39
CPSF7-202ENST00000394888 EDARADDQ8WWZ3 215 aa12.65□□□□□ -0.39
CPSF7-202ENST00000394888 ZCCHC14Q8WYQ9 949 aaKnown RBP12.65□□□□□ -0.39
CPSF7-202ENST00000394888 SLC25A22Q9H936 323 aa12.65□□□□□ -0.39
CPSF7-202ENST00000394888 CALYQ9NYX4 217 aa12.65□□□□□ -0.39
CPSF7-202ENST00000394888 ASH1LQ9NR48 2969 aaKnown RBP12.64□□□□□ -0.39
CPSF7-202ENST00000394888 YLPM1P49750 1951 aaKnown RBP12.64□□□□□ -0.39
CPSF7-202ENST00000394888 SAA2-SAA4A0A096LPE2 208 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms